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UNITED STATES
SECURITIES AND EXCHANGE COMMISSION

Washington, D.C. 20549

FORM 10-Q

(Mark One)
þ  QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the quarterly period ended March 31, 2005

OR

o  TRANSITION REPORT PURSUANT TO SECTION 13 OR 15(d) OF THE SECURITIES EXCHANGE ACT OF 1934

For the transition period from                      to                     

Commission file number: 0-26802

CHECKFREE CORPORATION

(Exact name of registrant as specified in its charter)
     
Delaware   58-2360335
(State or Other Jurisdiction of   (I.R.S. Employer
Incorporation or Organization)   Identification No.)
     
4411 East Jones Bridge Road, Norcross, Georgia 30092
(Address of Principal Executive Offices, Including Zip Code)
     
(678) 375-3000
(Registrant’s Telephone Number, Including Area Code)
     
Not Applicable
(Former Name, Former Address and Former Fiscal Year, if Changed Since Last Report)

     Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to the filing requirements for at least the past 90 days. YES þ NO o

     Indicate by check mark whether the registrant is an accelerated filer (as defined in Rule 12b-2 of the Exchange Act). YES þ NO o

     Indicate the number of shares outstanding of each of the issuer’s classes of common stock, as of the latest practicable date: 91,050,750 shares of Common Stock, $.01 par value, were outstanding at May 4, 2005.

 
 

 


FORM 10-Q

CHECKFREE CORPORATION

Table of Contents

         
    Page No.  
       
       
    3  
    4  
    5  
    6  
    14  
    32  
    33  
       
    34  
    35  
 EX-31(A)
 EX-31(B)
 EX-32(A)
 EX-32(B)

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Table of Contents

Part I. Financial Information

Item 1. Financial Statements

CHECKFREE CORPORATION AND SUBSIDIARIES

Unaudited Consolidated Balance Sheets
                 
    March 31,     June 30,  
    2005     2004  
    (In thousands, except share data)  
ASSETS
               
CURRENT ASSETS:
               
Cash and cash equivalents
  $ 111,547     $ 134,832  
Settlement assets
    81,978       82,520  
Investments
    236,068       73,197  
Accounts receivable, net
    111,961       85,217  
Accounts receivable, related parties
    5,770       26,632  
Prepaid expenses and other assets
    24,724       14,727  
Deferred income taxes
    10,171       49,129  
 
           
Total current assets
    582,219       466,254  
PROPERTY AND EQUIPMENT, NET
    88,264       91,912  
OTHER ASSETS:
               
Capitalized software, net
    8,128       11,512  
Goodwill
    615,292       612,971  
Strategic agreements, net
    178,433       271,390  
Other intangible assets, net
    16,174       21,670  
Investments
    67,371       68,344  
Other noncurrent assets
    4,622       4,396  
Deferred income taxes
    23,342        
Investment in joint venture
    185       483  
 
           
Total other assets
    913,547       990,766  
 
           
Total assets
  $ 1,584,030     $ 1,548,932  
 
           
 
               
LIABILITIES AND STOCKHOLDERS’ EQUITY
               
CURRENT LIABILITIES:
               
Accounts payable
  $ 10,211     $ 12,234  
Settlement obligations
    82,139       82,611  
Accrued liabilities
    64,142       67,211  
Current portion of long-term obligations
    2,564       4,192  
Deferred revenue
    39,300       36,193  
 
           
Total current liabilities
    198,356       202,441  
ACCRUED RENT AND OTHER
    5,674       4,313  
DEFERRED INCOME TAXES
          17,492  
CAPITAL LEASE AND LONG-TERM OBLIGATIONS — LESS CURRENT PORTION
    25,300       25,504  
STOCKHOLDERS’ EQUITY:
               
Preferred stock - 50,000,000 authorized shares, $0.01 par value; no amounts issued or outstanding
           
Common stock - 500,000,000 authorized shares, $0.01 par value; issued and outstanding 91,031,220 and 90,164,926 shares, respectively
    910       902  
Additional paid-in-capital
    2,499,277       2,471,062  
Unearned compensation
    (6,658 )      
Accumulated other comprehensive loss
    (1,631 )     (728 )
Accumulated deficit
    (1,137,198 )     (1,172,054 )
 
           
Total stockholders’ equity
    1,354,700       1,299,182  
 
           
Total liabilities and stockholders’ equity
  $ 1,584,030     $ 1,548,932  
 
           

See Notes to Interim Unaudited Condensed Consolidated Financial Statements

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Table of Contents

CHECKFREE CORPORATION AND SUBSIDIARIES

Unaudited Condensed Consolidated Statements of Operations
                                 
    Three Months Ended     Nine Months Ended  
    March 31,     March 31,  
    2005     2004     2005     2004  
            (In thousands, except per share data)          
REVENUES:
                               
Processing and servicing:
                               
Third parties
  $ 160,601     $ 123,576     $ 468,631     $ 360,468  
Related parties
    9,000       11,250       24,000       30,250  
 
                       
Total processing and servicing
    169,601       134,826       492,631       390,718  
License fees
    5,458       7,628       18,987       17,306  
Maintenance fees
    7,967       7,044       22,778       21,157  
Other
    8,194       5,740       20,413       17,257  
 
                       
Total revenues
    191,220       155,238       554,809       446,438  
 
                       
EXPENSES:
                               
Cost of processing, servicing and support
    72,745       60,732       220,795       180,818  
Research and development
    20,769       17,199       60,321       48,204  
Sales and marketing
    16,838       13,126       47,346       38,657  
General and administrative
    15,469       12,413       43,934       35,608  
Depreciation and amortization
    43,593       42,381       131,253       135,378  
In-process research and development
                      324  
 
                       
Total expenses
    169,414       145,851       503,649       438,989  
 
                       
INCOME FROM OPERATIONS
    21,806       9,387       51,160       7,449  
OTHER:
                               
EQUITY IN NET LOSS OF JOINT VENTURE
    (823 )           (2,170 )      
INTEREST INCOME (EXPENSE), NET
    2,143       1,098       5,329       (8,490 )
GAIN ON INVESTMENTS
    592             592        
 
                       
INCOME (LOSS) BEFORE INCOME TAXES
    23,718       10,485       54,911       (1,041 )
INCOME TAX EXPENSE (BENEFIT)
    8,112       2,789       20,055       (172 )
 
                       
NET INCOME (LOSS)
  $ 15,606     $ 7,696     $ 34,856     $ (869 )
 
                       
 
                               
BASIC INCOME (LOSS) PER SHARE:
                               
Income (loss) per common share
  $ 0.17     $ 0.09     $ 0.38     $ (0.01 )
 
                       
Equivalent number of shares
    90,864       89,924       90,614       89,669  
 
                       
 
                               
DILUTED INCOME (LOSS) PER SHARE:
                               
Income (loss) per common share
  $ 0.17     $ 0.08     $ 0.38     $ (0.01 )
 
                       
Equivalent number of shares
    93,052       92,053       92,374       89,669  
 
                       

See Notes to Interim Unaudited Condensed Consolidated Financial Statements

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CHECKFREE CORPORATION AND SUBSIDIARIES

Unaudited Consolidated Statements of Cash Flows
                 
    Nine Months Ended  
    March 31,  
    2005     2004  
    (In thousands)  
OPERATING ACTIVITIES:
               
Net income (loss)
  $ 34,856     $ (869 )
Adjustments to reconcile net income (loss) to net cash provided by operating activities:
               
Equity in net loss of joint venture
    2,170        
Depreciation and amortization
    131,253       135,378  
Deferred income tax provision (benefit)
    2,337       (11,767 )
Equity-based compensation
    5,404        
Gain on investments
    (592 )      
Write off of convertible notes issuance costs
          2,407  
Write off of in-process research and development
          324  
Net loss on disposition of property and equipment
          9  
Change in certain assets and liabilities:
               
Settlement assets and obligations
    70        
Accounts receivable
    (6,327 )     (7,027 )
Prepaid expenses and other
    (12,194 )     1,213  
Accounts payable
    (1,824 )     (591 )
Accrued liabilities and other
    839       (681 )
Deferred revenue
    3,107       (1,196 )
 
           
Net cash provided by operating activities
    159,099       117,200  
INVESTING ACTIVITIES:
               
Purchase of property and software
    (24,331 )     (16,893 )
Capitalization of software development costs
    (1,437 )     (2,269 )
Purchase of business, net of cash acquired
    (3,054 )     (16,173 )
Purchase of investments — Held-to-maturity
          (511 )
Proceeds from maturities of investments — Held-to-maturity
          32,279  
Purchase of investments — Available-for-sale
    (290,577 )     (135,602 )
Proceeds from investments — Available-for-sale
    128,505       142,829  
Purchase of other investments
    (100 )     (74 )
Proceeds from other investments
    26        
Investment in joint venture
    (1,872 )      
 
           
Net cash provided by (used in) investing activities
    (192,840 )     3,586  
FINANCING ACTIVITIES:
               
Principal payments under capital lease and other long-term obligations
    (2,457 )     (3,179 )
Redemption of convertible notes
          (172,500 )
Proceeds from stock options exercised
    8,646       5,584  
Proceeds from employee stock purchase plan
    3,408       2,630  
 
           
Net cash provided by (used in) financing activities
    9,597       (167,465 )
Effect of exchange rate changes on cash and cash equivalents
    859       172  
 
           
NET DECREASE IN CASH AND CASH EQUIVALENTS
    (23,285 )     (46,507 )
CASH AND CASH EQUIVALENTS:
               
Beginning of period
    134,832       209,358  
 
           
End of period
  $ 111,547     $ 162,851  
 
           

See Notes to Interim Unaudited Condensed Consolidated Financial Statements

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CHECKFREE CORPORATION AND SUBSIDIARIES

Notes to Interim Unaudited Condensed Consolidated Financial Statements
for the Three and Nine Months Ended March 31, 2005 and 2004

1. Basis of Presentation and Summary of Significant Accounting Policies

          Unaudited Interim Financial Information

          Our unaudited condensed consolidated financial statements and notes included in this Quarterly Report on Form 10-Q (“Form 10-Q”), are prepared in accordance with the rules and regulations of the United States Securities and Exchange Commission (“SEC”) and include all of the information and disclosures required by generally accepted accounting principles in the United States of America for interim financial reporting. Our results of operations for the three and nine months ended March 31, 2005 and 2004, are not necessarily indicative of our projected results for the full year.

          Please read our condensed consolidated financial statements in this Form 10-Q in conjunction with our consolidated financial statements, our significant accounting policies and our notes to the consolidated financial statements included in our Annual Report on Form 10-K for our fiscal year ended June 30, 2004, which we filed with the SEC on September 3, 2004. In our opinion, our accompanying unaudited condensed consolidated financial statements reflect all adjustments (consisting only of normal recurring adjustments), which are necessary for a fair representation of our financial results for the presented interim periods.

          Stock-Based Compensation

          We account for stock-based compensation under the provisions and related interpretations of Accounting Principles Board (“APB”) Opinion 25, “Accounting for Stock Issued to Employees.” Accordingly, we are not required to record compensation expense when stock options are granted to our employees as long as the exercise price is not less than the fair market value of the stock when the option is granted. Also, we are not required to record compensation expense when stock options are granted under our Associate Stock Purchase Plan as long as the purchase price is not less than 85% of the lower of the fair market value at the beginning or end of each offer period. In October 1995, the Financial Accounting Standards Board (“FASB”) issued Statement of Financial Accounting Standards (“SFAS”) 123, “Accounting for Stock-Based Compensation.” SFAS 123 allows us to continue to follow the present APB Opinion 25 guidelines, but requires pro-forma disclosures of net income and earnings per share as if we had adopted the provisions of the Statement. In December 2002, the FASB issued SFAS 148, “Accounting for Stock-Based Compensation — Transition and Disclosure — an Amendment of FASB Statement No. 123,” which provides alternative methods of transition for an entity that voluntarily changes to the fair value based method of accounting for stock-based employee compensation. We continue to account for stock-based compensation under the provisions of APB Opinion 25 using the intrinsic value method.

          Had compensation cost for our stock-based compensation plans been determined based on the fair value at the grant dates for awards under those plans in accordance with the provisions of SFAS 123, our net income (loss) and net income (loss) per share would have been as follows (in thousands, except per share data):

                                 
    Three Months Ended     Nine Months Ended  
    March 31,     March 31,  
    2005     2004     2005     2004  
Net income (loss), as reported
  $ 15,606     $ 7,696     $ 34,856     $ (869 )
Stock-based compensation included in net income (loss)
    913       346       2,793       1,381  
Stock-based compensation under SFAS 123
    (2,067 )     (3,124 )     (7,234 )     (13,200 )
 
                       
Pro forma net income (loss)
  $ 14,452     $ 4,918     $ 30,415     $ (12,688 )
 
                       
Pro forma net income (loss) per share:
                               
Basic
  $ 0.16     $ 0.05     $ 0.34     $ (0.14 )
 
                       
Diluted
  $ 0.16     $ 0.05     $ 0.33     $ (0.14 )
 
                       

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          Recent Accounting Pronouncements

          In December 2004, the FASB issued a revision to SFAS 123. FASB Statement No. 123 (R), “Share-Based Payment” (“SFAS 123 (R)”), supersedes APB Opinion No. 25, “Accounting for Stock Issued to Employees,” and its related implementation guidance. SFAS 123 (R) requires all share-based payments to employees, including grants of employee stock options and shares purchased under an employee stock purchase plan (if certain parameters are not met), to be recognized in the financial statements based on their fair values. Under our Associate Stock Purchase Plan as currently defined, the shares purchased by our employees on June 30 and December 31 of each year would be required to be recorded at fair value within our financial statements under the guidance of SFAS 123 (R) as our Plan currently offers a look-back feature as well as a discount in excess of 5%.

          On April 14, 2005, the SEC announced the adoption of a new rule that amended the compliance date of SFAS 123(R). The new rule allows companies to implement SFAS 123(R) at the beginning of the next fiscal year, instead of the next reporting period, beginning after June 15, 2005. For us, the amended effective date did not delay our adoption date. As a result, we will adopt this Statement in the first quarter of our 2006 fiscal year (quarter ending September 30, 2005) using the modified prospective method and are currently evaluating the impact that the adoption of SFAS 123 (R) will have on our financial statements.

          Reclassifications

          Certain amounts in the prior years’ financial statements have been reclassified to conform to the fiscal year 2005 presentation.

2. Investments

          Our investments consist of the following (in thousands):

                 
    March 31,     June 30,  
    2005     2004  
Available-for-sale
  $ 404,590     $ 243,526  
Other investments
    796       725  
Less: amounts classified as cash equivalents
    101,947       102,710  
 
           
Total investments
  $ 303,439     $ 141,541  
 
           

          We base the fair value of available-for-sale securities on quoted market values. In the three and nine months ended March 31, 2005, we sold available-for-sale investments in the amount of approximately $1,600,000,000 and $3,000,000,000, respectively. In the three and nine months ended March 31, 2004, we sold available-for-sale investments in the amount of $432,900,000 and $2,100,000,000, respectively. We recognized gross gains of $0 and $3,000 as well as gross losses of $0 and $5,000 on these sales during the three months ended March 31, 2005 and 2004, respectively. We recognized gross gains of $4,000 and $246,000 as well as gross losses of $40,000 and $479,000 on these sales during the nine months ended March 31, 2005, and 2004, respectively.

          In the quarter ended March 31, 2005, we recorded a $592,000 gain on the sale of stock. While we do not typically invest in equity securities, we received shares of stock from an insurance vendor that demutualized. We sold the shares shortly after we received them, and recorded the proceeds as a gain on investments.

          Starting with the current period, we are classifying all auction rate preferred and debt instruments as available-for-sale securities. Previously, such securities were classified as cash equivalents if the auction reset periods were three months or less. We did not have any auction rate securities as of June 30, 2004.

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3. Goodwill and Other Intangible Assets

          On July 1, 2002, we adopted SFAS 142, “Goodwill and Other Intangible Assets.” SFAS 142 changes the accounting for goodwill and other intangible assets. Goodwill is no longer subject to amortization over its estimated useful life. Rather, goodwill is subject to at least an annual assessment for impairment by applying a fair-value-based test. Our annual impairment test is performed on April 30th of each year.

          In November 2003, we completed our acquisition of HelioGraph, Ltd. (“HelioGraph”) for approximately $18,756,000 in cash. Our acquisition added a financial transactions management solution with straight through processing and financial messaging expertise to our reconciliation suite of products, in addition to expanding our international presence. HelioGraph is part of our International Operations business unit within our Software division. During the six-month period ended December 31, 2004, we received a refund of an escrow deposit in the amount of $223,000.

          In June 2004, we completed our acquisition of American Payment Systems, Inc. (“APS”) from its parent corporation UIL Holdings Corporation, for approximately $109,013,000 in cash, subject to certain post-closing adjustments. We completed the acquisition in order to penetrate a part of the electronic billing and payment market in which we had not significantly previously participated. APS is part of our Electronic Commerce division and a leading provider of walk-in bill payments. We treated our acquisition of APS as a purchase for accounting purposes, and, accordingly, recorded purchased assets and liabilities based on their fair market values at the date of acquisition. Based on the preliminary purchase price allocation, we recorded goodwill of approximately $75,000,000. During the six-month period ended December 31, 2004, we made a final purchase price adjustment of $3,277,000. We recorded $733,000 of deferred tax assets related to our final purchase price adjustments.

          As of March 31, 2005, our only non-amortizing intangible asset is goodwill. The changes in the carrying value of goodwill by segment from June 30, 2003 to March 31, 2005, were as follows (in thousands):

                                 
    Electronic             Investment        
    Commerce     Software     Services     Total  
Balance as of June 30, 2003
  $ 503,738     $ 8,106     $ 11,387     $ 523,231  
Goodwill acquired
    74,957       14,783             89,740  
 
                       
Balance as of June 30, 2004
    578,695       22,889       11,387       612,971  
Purchase price adjustments
    2,544       (223 )           2,321  
 
                       
Balance as of March 31, 2005
  $ 581,239     $ 22,666     $ 11,387     $ 615,292  
 
                       

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          The components of our various amortized intangible assets are as follows (in thousands):

                 
    March 31,     June 30,  
    2005     2004  
Capitalized software:
               
Product technology from acquisitions and strategic agreement
  $ 167,458     $ 167,458  
Internal development costs
    32,956       31,519  
 
           
Total
    200,414       198,977  
Less: accumulated amortization
    192,286       187,465  
 
           
Capitalized software, net
  $ 8,128     $ 11,512  
 
           
 
               
Strategic agreements:
               
Strategic agreements (1)
  $ 744,424     $ 744,424  
Less: accumulated amortization
    565,991       473,034  
 
           
Strategic agreements, net
  $ 178,433     $ 271,390  
 
           
 
               
Other intangible assets:
               
Tradenames
  $ 50,728     $ 50,728  
Customer base
    46,068       46,068  
Current technology
    2,230       2,230  
Money transfer license
    1,700       1,700  
Covenants not to compete
    2,860       2,860  
 
           
Total
    103,586       103,586  
Less: accumulated amortization
    87,412       81,916  
 
           
Other intangible assets, net
  $ 16,174     $ 21,670  
 
           


(1)   Strategic agreements primarily include certain entity-level covenants not to compete.

          Amortization of intangible assets totaled $34,213,000 and $33,431,000 for the three months ended March 31, 2005 and 2004, respectively. Amortization of intangible assets totaled $103,274,000 and $108,768,000 for the nine months ended March 31, 2005 and 2004, respectively.

4. Common Stock

          In the nine months ended March 31, 2005, we issued stock for various employee benefit programs. We issued 108,484 shares of common stock to fund our 401(k) match, the cost of which we accrued during the year ended June 30, 2004, and 165,098 shares of common stock in conjunction with our Associate Stock Purchase Plan, which were funded through employee payroll deductions. We also issued 341,837 shares of restricted stock related to a Long-Term Incentive Compensation (“LTIC”) program under our 2002 Stock Incentive Plan and recorded unearned compensation of $8,721,000 within stockholders’ equity during the nine-month period ended March 31, 2005. The shares of restricted stock granted under the LTIC program have a five-year vesting period with an accelerated vesting provision of three years based on achievement of specific goals and objectives. We recorded an expense of approximately $2,063,000 for the nine months ended March 31, 2005 related to the LTIC program.

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          In June 2003, we made an offer (the “Tender Offer”) to certain of our employees to exchange options with exercise prices greater than or equal to $44.00 per share that were then outstanding under our 1983 Incentive Stock Option Plan, 1983 Non-Statutory Stock Option Plan, 1993 Stock Option Plan, Third Amended and Restated 1995 Stock Option Plan, BlueGill Technologies, Inc. 1997 Stock Option Plan, BlueGill Technologies, Inc. 1998 Incentive and Non-Qualified Stock Option Plan, and 2002 Stock Incentive Plan, for restricted stock units of our common stock, and in certain cases, cash payments. Restricted stock units that we issued under the Tender Offer vest ratably over a three-year period. The offer period closed on July 17, 2003, and employees holding 1,165,035 options participated in the Tender Offer. We made cash payments totaling $586,000 in July 2003, representing the cash consideration portion of the Tender Offer. We issued 51,143 shares in the nine-month period ended March 31, 2005. Approximately 154,000 shares of restricted stock units are scheduled to vest under the 2002 Stock Incentive Plan over the next year and six months. We recorded an expense of approximately $1,533,000 for the nine-month period ended March 31, 2005 related to the vesting of restricted stock units and recorded an expense of $1,143,000 for the three months ended September 30, 2003, for cash payments incurred and the vesting of restricted stock units under the Tender Offer.

5. Earnings (Loss) Per Share

          The following table reconciles the differences in our income (loss) and shares outstanding between basic and diluted for the periods indicated (in thousands, except per share data):

                                                 
    For the Three Months Ended  
    March 31, 2005     March 31, 2004  
                    Per-                     Per-  
    Income     Shares     Share     Income     Shares     Share  
    (Numerator)     (Denominator)     Income     (Numerator)     (Denominator)     Income  
Basic EPS
  $ 15,606       90,864     $ 0.17     $ 7,696       89,924     $ 0.09  
 
                                           
Effect of dilutive securities:
                                               
Options and warrants
          2,188                     2,129          
 
                                       
Diluted EPS
  $ 15,606       93,052     $ 0.17     $ 7,696       92,053     $ 0.08  
 
                                   
                                                 
    For the Nine Months Ended  
    March 31, 2005     March 31, 2004  
                    Per-                     Per-  
    Income     Shares     Share     Loss     Shares     Share  
    (Numerator)     (Denominator)     Income     (Numerator)     (Denominator)     Loss  
Basic EPS
  $ 34,856       90,614     $ 0.38     $ (869 )     89,669     $ (0.01 )
 
                                           
Effect of dilutive securities:
                                               
Options and warrants
          1,760                              
 
                                       
Diluted EPS
  $ 34,856       92,374     $ 0.38     $ (869 )     89,669     $ (0.01 )
 
                                   

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          Anti-dilution provisions of SFAS 128, “Earnings Per Share,” require consistency between diluted per-common-share amounts and basic per-common-share amounts in loss periods. Had we recognized net income for the nine-month period ended March 31, 2004, we would have included an additional 5,354,000 of in-the-money options and warrants in the diluted earnings per share calculation. Using the treasury stock purchase method prescribed by SFAS 128, this would have increased diluted shares outstanding by 1,933,000 for the nine months ended March 31, 2004.

          The weighted average diluted common shares outstanding for the three and nine months ended March 31, 2005 excludes the effect of approximately 2,054,000 and 2,637,000 out-of-the-money options and warrants as their effect would be anti-dilutive. The weighted average diluted common shares outstanding for the three and nine months ended March 31, 2004, excludes the effect of approximately 2,961,000 and 3,255,000 out-of-the-money options and warrants, and the effect of 2,357,000 shares for the assumed conversion of the convertible subordinated notes, as their effect would be anti-dilutive. In addition, for the three and nine months ended March 31, 2004, the after-tax effect of interest expense on the convertible subordinated notes has not been added back to the numerator, as its effect would also be anti-dilutive.

6. Reorganization Charges

          We expect our previously announced reorganizations to be completed by October 2005. A summary of activity related to our reorganization reserve is as follows (in thousands):

         
    Office Closure  
    and Business  
    Exit Costs  
Balance as of June 30, 2003
  $ 1,537  
Cash payments, year ended June 30, 2004
    (805 )
 
     
Balance as of June 30, 2004
    732  
Cash payments, nine months ended March 31, 2005
    (417 )
 
     
Balance as of March 31, 2005
  $ 315  
 
     

7. Supplemental Disclosure of Cash Flow Information (in thousands)

                 
    Nine Months Ended  
    March 31,  
    2005     2004  
Interest paid
  $ 544     $ 5,986  
 
           
Call premium paid for redemption of convertible notes
  $     $ 4,813  
 
           
Income taxes paid
  $ 24,245     $ 8,322  
 
           
Supplemental disclosure of non-cash investing and financing activities:
               
Capital lease and other long-term asset additions
  $ 625     $ 954  
 
           
Stock funding of 401(k) match
  $ 29     $ 3,144  
 
           
Stock funding of Associate Stock Purchase Plan
  $ 3,997     $ 3,208  
 
           

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8. Related Parties

          On September 1, 2000, we acquired MSFDC, L.L.C. (“TransPoint”) from Microsoft Corporation (“Microsoft”), First Data Corporation (“First Data”), and Citibank, N.A. in exchange for 17 million shares of our common stock. As part of the TransPoint acquisition, Microsoft received 8,567,250 shares of our common stock and Microsoft continued to own those shares as of March 31, 2005. Pursuant to the terms of the TransPoint acquisition, Microsoft is entitled to nominate one director to our board for such time as they own at least 6,425,438 shares of common stock. Therefore, Microsoft is considered a related party.

          In addition, we entered into a commercial alliance agreement with Microsoft as part of the TransPoint acquisition. Under the terms of the commercial alliance agreement, Microsoft, among other things, agreed to use us for pay anyone and bill presentment services offered by Microsoft. Our commercial alliance agreement also provides for a minimum fee and revenue guarantee to us of $120 million over the five year term of the agreement.

          Pursuant to the terms of the TransPoint acquisition, First Data was entitled to nominate one director to our board for such time as they own at least 4,925,438 shares of common stock. Although First Data owned less than 4,925,438 shares of common stock as of March 31, 2005, First Data owned in excess of 4,925,438 shares of common stock at the time of the director’s most recent re-election to the board. On July 27, 2004, the director resigned from our board of directors. Since First Data did not maintain the required level of share ownership, they no longer have the right to appoint a member of our board of directors. Although First Data remains a customer of ours, First Data was not considered to be a related party beginning with our quarter ended September 30, 2004.

          In addition, we entered into a marketing agreement with First Data as part of the TransPoint acquisition. Under the terms of the marketing agreement, we agreed to use certain First Data payment processing services if, in each case using reasonable judgment, substantially similar services are not then obtainable from a third party at an overall economic cost to us that is less than the overall economic cost of First Data’s services. The marketing agreement also provides for a minimum fee and revenue guarantee to us of $60 million over the five-year term of the agreement. On January 10, 2002, we entered into an agreement for check processing services with Integrated Payment Systems Inc., a subsidiary of First Data.

          Microsoft and First Data operate substantially below their minimum monthly commitments, and we do not expect these customers to increase their activity such that they would operate above the minimum commitments in the next twelve months.

9. Comprehensive Income (Loss)

          We record available-for-sale securities at fair value and we record changes in fair value as unrealized gains or losses and we accumulate these items in other comprehensive income (loss). As a result, we are required to report the components of our comprehensive income (loss), which are as follows (in thousands):

                                 
    Three Months Ended     Nine Months Ended  
    March 31,     March 31,  
    2005     2004     2005     2004  
Net income (loss)
  $ 15,606     $ 7,696     $ 34,856     $ (869 )
Other comprehensive income (loss):
                               
Foreign currency translation adjustments
    (177 )     108       283       108  
Unrealized gains (losses) on available-for-sale investments, net of tax
    (1,095 )     135       (1,186 )     (235 )
 
                       
Comprehensive income (loss)
  $ 14,334     $ 7,939     $ 33,953     $ (996 )
 
                       

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10. Business Segments

          We operate in three business segments - Electronic Commerce, Investment Services, and Software, along with a Corporate segment. These reportable segments are strategic business units through which we offer different products and services. We evaluate the performance of our segments based on their respective revenues and operating income (loss). Segment operating income (loss) excludes acquisition related intangible asset amortization and significant one-time charges. There are no inter-segment sales.

          The following sets forth certain financial information attributable to our business segments for the three and nine months ended March 31, 2005 and 2004 (in thousands):

                                 
    Three Months Ended     Nine Months Ended  
    March 31,     March 31,  
    2005     2004     2005     2004  
Revenues:
                               
Electronic Commerce
  $ 147,581     $ 115,181     $ 427,896     $ 334,224  
Investment Services
    24,043       21,546       70,858       63,304  
Software
    19,596       18,511       56,055       48,910  
 
                       
Total
  $ 191,220     $ 155,238     $ 554,809     $ 446,438  
 
                       
 
                               
Segment operating income (loss):
                               
Electronic Commerce
  $ 54,034     $ 41,001     $ 151,864     $ 113,884  
Investment Services
    4,837       4,485       13,021       14,011  
Software
    6,067       4,554       13,369       10,347  
Corporate
    (10,001 )     (8,584 )     (27,537 )     (25,807 )
 
                       
Total
    54,937       41,456       150,717       112,435  
Purchase accounting amortization
    (33,131 )     (32,069 )     (99,557 )     (104,662 )
Write off of in-process research and development costs
                      (324 )
Gain on investments
    592             592        
Equity in net loss of joint venture
    (823 )           (2,170 )      
Interest, net
    2,143       1,098       5,329       (8,490 )
 
                       
Total income (loss) before income taxes
  $ 23,718     $ 10,485     $ 54,911     $ (1,041 )
 
                       

11. Subsequent Events

          On April 30, 2005, we completed the acquisition of Accurate Software Limited, a United Kingdom-based provider of reconciliation, exception management, workflow and business intelligence solutions for approximately $56 million in cash. Accurate Software Limited will become a part of our Software Division to further solidify our leadership in financial software and services, expand our global presence and client base, and drive continued product innovation in operational risk management solutions for banks, securities firms and corporations. The effect of this acquisition will not be material to us.

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Item 2. Management’s Discussion and Analysis of Financial Condition and Results of Operations

Overview

          CheckFree was founded in 1981 as an electronic payment processing company and has become a leading provider of financial electronic commerce products and services. Our current business was developed through the expansion of our core electronic payments business and the acquisition of companies operating in similar or complementary businesses.

          We operate our business through three independent but inter-related divisions:

  •   Electronic Commerce;
 
  •   Investment Services; and
 
  •   Software.

          Through our Electronic Commerce division, we enable consumers to receive and pay bills electronically. For the year ended June 30, 2004, we processed approximately 583 million payment transactions and delivered approximately 82 million e-Bills. For the quarter ended March 31, 2005, we processed more than 234 million payment transactions and delivered almost 37 million e-Bills. The number of transactions we process each year continues to grow. Transaction growth exceeded 34% for the year ended June 30, 2004, and was 7% for the quarter ended March 31, 2005, compared to the quarter ended December 31, 2004. On June 22, 2004, we acquired American Payment Systems, Inc. (“APS”), a leading provider of walk-in bill payment services to consumers. As part of our Electronic Commerce division, these services enable us to reach an additional group of consumers we had not previously serviced and to provide an additional service to our biller clients. The Electronic Commerce division accounted for approximately 77% of our revenue in the quarter ended March 31, 2005.

          Electronic Commerce division products enable consumers to:

  •   receive e-Bills through the Internet;
 
  •   pay any bill – whether it arrives over the Internet or through traditional mail – to anyone; and
 
  •   make payments not related to bills – to anyone.

          Through our Investment Services division, we provide a range of portfolio management services to help financial institutions, including broker dealers, money managers and investment advisors, deliver portfolio management, performance measurement and reporting services to their clients, primarily for processing separately managed accounts (“SMA” or “SMAs”). Our client base includes investment advisors, brokerage firms, banks and insurance companies. Our fee-based money manager clients are typically sponsors or managers of “wrap,” or SMAs, money management products, or institutional money managers, managing investments of institutions and high net worth individuals. As of March 31, 2005, our clients used the CheckFree APLSM portfolio accounting system to manage approximately 1.8 million portfolios, representing more than $1 trillion in assets. Our Investment Services division accounted for approximately 13% of our revenue in the quarter ended March 31, 2005.

          Our portfolio management products and services provide the following functions:

  •   proposal generation;
 
  •   account open and trading capabilities;
 
  •   performance measurement and reporting;
 
  •   tax lot accounting;
 
  •   multiple strategy portfolios;
 
  •   straight through processing; and
 
  •   Depository Trust Corporation interfacing.

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          Through our Software division, we deliver software, maintenance, support and professional services to large financial service providers and other companies across a range of industries. Our Software division is comprised of two units, North American Operations and International Operations, together providing three sets of software products. ACH software and services are used to process more than two-thirds of the United States’ ten billion annual Automated Clearing House (“ACH”) payments. CheckFree Financial and Compliance Solutions (“CFACS”) software and services enable organizations to handle their reconciliation and compliance requirements and to provide a financial transactions management solution with straight through processing. Our i-Solutions software and services enable end-to-end e-billing and e-statement creation, delivery and payment. Our Software division accounted for approximately 10% of our revenue in the quarter ended March 31, 2005.

Executive Summary

          For the quarter ended March 31, 2005, we earned net income of $15.6 million compared to net income of $7.7 million for the same period last year, and we generated $49.9 million of free cash flow, an increase of $8.9 million, or 22%, over the same period last year. For the nine-month period ended March 31, 2005, we earned $34.9 million of net income compared to a net loss of $0.9 million for the same period last year and we generated $134.7 million of free cash flow, an increase of $34.4 million, or 34%, over the same period last year. See “Use of Non-GAAP Financial Information” for our definition and discussion of free cash flow. We became a cash basis tax payer in the current fiscal year. Our efforts to improve quality and efficiency throughout our operations have resulted in increasingly positive operating results, allowing us to continue to invest toward the future growth of our businesses. Because of better than expected results through the first half of fiscal 2005, we launched previously unplanned initiatives of between $4.0 million and $6.0 million for the second half of fiscal 2005, across all of our business segments that are geared toward future growth. We incurred about one third of these expenses in the quarter ended March 31, 2005.

          Beyond additional walk-in bill payment transaction volume and related revenue resulting from our acquisition of APS on June 22, 2004, we continued to experience solid revenue growth in our Electronic Commerce business. Transaction volume, including walk-in bill payments, exceeded 234 million, and transaction growth exceeded 54% in the quarter ended March 31, 2005, as compared to the same period last year. Additionally, we delivered almost 37 million e-Bills in the quarter ended March 31, 2005, an increase of 64% over the same period last year. We believe that the added availability of e-Bills make electronic payment offerings increasingly more compelling to consumers. Continued efforts to improve quality and efficiency in our operations, combined with an improving electronic versus paper payment rate and our ability to leverage a significant fixed cost base, have resulted in a steadily reducing cost per transaction, and have allowed us to provide customer focused volume-based pricing discounts in our Electronic Commerce business.

          Our Investment Services division achieved revenue growth of 12% in the quarter ended March 31, 2005, as compared to the same period last year. Portfolio growth, which is dependent primarily on the growth of the United States stock market, has started to resume. We are cautiously optimistic about continued near-term portfolio growth. We continue to invest heavily in our Investment Services operating process platform to position ourselves to take full advantage of the emerging SMA market. We expect our near-term operating margin to lag historical levels over the next 15 to 21 months, until this development effort is complete.

          Our Software division achieved revenue growth of 6% in the quarter ended March 31, 2005, as compared to the same period last year. Our March 31, 2005 quarter followed a strong December 31, 2004 quarter, and as a result, revenue growth was 15% for the nine-month period ended March 31, 2005, as compared to the same period last year. Growth in relatively high margin license revenue has resulted in improved operating margins. However, we remain uncertain as to whether this represents the beginning of a growth trend in software sales.

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          As part of our acquisition of TransPoint in September 2000, we entered into separate five-year agreements with Microsoft Corporation (“Microsoft”) and First Data Corporation (“FDC”), both of which include monthly minimum revenue guarantees that have increased annually over the term of the agreements. These contracts will expire in fiscal 2006, which we expect to result in a temporary decline in revenue growth, primarily in the quarter ending March 31, 2006. The following table represents the relevant annual minimum revenue guarantees with Microsoft and FDC (in thousands):

                         
Fiscal Year Ended June 30,   Microsoft   FDC   Total
2004
  $ 27,000     $ 14,500     $ 41,500  
2005
  $ 33,000     $ 17,500     $ 50,500  
2006
  $ 18,000     $ 3,000     $ 21,000  

          Both agreements are operating substantially below their minimum levels. However, we believe we can manage investment levels and improved scale in electronic billing in order to maintain our total company targeted operating margin in the mid to upper 20% level on a full-year basis in fiscal 2006. Additionally, we plan to continue to pursue other opportunities for growth, as our recent electronic billing and payment (“EBP”) contract signings and our APS acquisition demonstrate.

          The following table sets forth as percentages of total revenues, certain consolidated statements of operations data:

                                 
    Three Months Ended     Nine Months Ended  
    March 31,     March 31,  
    2005     2004     2005     2004  
Total Revenues:
    100.0 %     100.0 %     100.0 %     100.0 %
 
Expenses:
                               
Cost of processing, servicing and support
    38.0       39.1       39.8       40.5  
Research and development
    10.9       11.1       10.9       10.8  
Sales and marketing
    8.8       8.5       8.5       8.7  
General and administrative
    8.1       8.0       7.9       8.0  
Depreciation and amortization
    22.8       27.2       23.7       30.3  
In-process research and development
                       
 
                       
Total expenses
    88.6       93.9       90.8       98.3  
 
                       
 
                               
Income from operations
    11.4       6.1       9.2       1.7  
 
                               
Equity in net loss of joint venture
    (0.4 )           (0.4 )      
Interest, net
    1.1       0.7       1.0       (1.9 )
Gain on investments
    0.3             0.1        
 
                       
 
                               
Income (loss) before income taxes
    12.4       6.8       9.9       (0.2 )
 
                               
Income tax expense
    4.2       1.8       3.6        
 
                       
 
                               
Net income (loss)
    8.2 %     5.0 %     6.3 %     (0.2 )%
 
                       

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Results of Operations

          The following table sets forth total company revenue for the three- and nine-month periods ended March 31, 2005, and 2004, respectively.

                                 
Total Revenues (000's)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 191,220     $ 155,238     $ 35,982       23.2 %
 
                               
Nine months ended
  $ 554,809     $ 446,438     $ 108,371       24.3 %

          Quarter-over-quarter revenue growth was driven by 28% growth in our Electronic Commerce business, 12% growth in our Investment Services business and 6% growth in our Software business. Year-over-year revenue growth was driven by 28% growth in our Electronic Commerce business, 12% growth in our Investment Services business and 15% growth in our Software business.

          Our walk-in bill payment business provided more than 10% of the quarter-over-quarter and year-over-year revenue growth in our Electronic Commerce business. Overall growth in Electronic Commerce, including walk-in bill payment, continues to be driven primarily by growth in transactions processed, from approximately 152 million for the quarter ended March 31, 2004, to more than 234 million for the quarter ended March 31, 2005, and from approximately 418 million for the nine-month period ended March 31, 2004, to more than 660 million for the nine-month period ended March 31, 2005. Additionally, we delivered almost 37 million e-Bills in the quarter ended March 31, 2005, an increase of 64% compared to the nearly 23 million e-Bills delivered in the quarter ended March 31, 2004, and we delivered more than 101 million e-Bills in the nine-month period ended March 31, 2005, representing 80% growth over the 56 million e-Bills delivered in the same period last year. Lastly, with interest rates increasing since this time last year, we are experiencing growth in our interest-sensitive products such as Account Balance Transfer (“ABT”). This combined growth in our Electronic Commerce division was offset somewhat by our pricing practices. We have established pricing models that provide volume-based discounts in order to share scale efficiencies with our customers. As a result of transaction growth, our average revenue per transaction has, therefore, declined over time with respect to our transaction-based revenue.

          Growth in Investment Services revenue was driven primarily by an increase in the number of portfolios managed, from about 1.5 million as of March 31, 2004, to approximately 1.8 million as of March 31, 2005. In some cases, we are adding new portfolios to our APL system at a lower price point, driven by the increased volume coming from lower priced broker dealers, and by conscious price reductions, where we trade off near-term revenue growth against long-term strategic advantage. We believe that more favorable market conditions have resulted in resumed growth in portfolios managed. We are cautiously optimistic about resulting growth opportunities.

          In our Software business, we achieved modest revenue growth of 6% for the three months ended March 31, 2005, compared to the same period last year. Our third quarter results follow a very strong December 2004 quarter. As a result, growth in revenue for the nine-month period ended March 31, 2005, was nearly 15% compared to the same period last year. In addition to new business resulting from our acquisition of HelioGraph, Ltd. (“HelioGraph”) in the quarter ended December 31, 2003, we achieved solid growth in our more mature ACH and reconciliation products. We believe this to be the result of improved execution within our Software division, combined with signs of recovery in the U.S. economy.

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     The following tables set forth comparative amounts, by type, for the three- and nine-month periods ended March 31, 2005 and 2004, respectively.

                                 
Processing and Servicing (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 169,601     $ 134,826     $ 34,775       25.8 %
 
                               
Nine months ended
  $ 492,631     $ 390,718     $ 101,913       26.1 %

     We earn processing and servicing revenue in both our Electronic Commerce and our Investment Services businesses. While growth in portfolios managed in our Investment Services business contributed positively, our quarter-over-quarter and year-over-year increases in processing and servicing revenue resulted primarily from the aforementioned growth in transactions processed in our Electronic Commerce business. This growth in transactions was positively influenced by our new walk-in bill payment business. Our traditional electronic bill payment business continued to grow as well, with sequential transaction growth of 7% remaining within our historical growth range of 6% to 10%. We delivered almost 37 million e-Bills in the quarter ended March 31, 2005, representing an increase of 64% from the nearly 23 million e-Bills delivered in the quarter ended March 31, 2004, and we delivered more than 101 million e-Bills in the nine months ended March 31, 2005, representing growth of 80% over the nearly 56 million e-Bills delivered in the same period last year. Additionally, with rising interest rates over the past year, we have experienced growth in revenue from our interest-sensitive products such as ABT. Overall quarter-over-quarter and year-over-year growth in processing and servicing revenue was somewhat offset by tier-based volume pricing discounts within both our Electronic Commerce and Investment Services businesses.

                                 
License Fees (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 5,458     $ 7,628     $ (2,170 )     (28.4 )%
 
                               
Nine months ended
  $ 18,987     $ 17,306     $ 1,681       9.7 %

     We derive license fee revenue from our Software division. Software license sales trends tend to be inconsistent from quarter to quarter. License revenue declined by almost $2.2 million from the three months ended March 31, 2004 to the three months ended March 31, 2005, due to the timing of stronger than expected sales in the quarter ended December 31, 2004. On a year-to-date basis, license revenue has grown by almost 10% from the nine month period ended March 31, 2004, to the nine-month period ended March 31, 2005. Growth in license revenue is impacted significantly by the addition of HelioGraph to our software portfolio in the December 2003 quarter. Despite moderate license revenue growth in fiscal 2005, we remain uncertain as to whether this represents the beginning of a general trend in continued software sales growth.

                                 
Maintenance Fees (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 7,967     $ 7,044     $ 923       13.1 %
 
                               
Nine months ended
  $ 22,778     $ 21,157     $ 1,621       7.7 %

     Maintenance revenue, which represents annually renewable product support for our software customers, is isolated to our Software business, and tends to grow with incremental license sales from previous periods. Our maintenance base has increased as a result of recent license sales, customer retention rates exceeding 80%, and moderate price increases across all our software product lines. Additionally, year-over-year maintenance growth has been positively impacted by the acquisition of HelioGraph in the quarter ended December 31, 2003.

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Other Revenues (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 8,194     $ 5,740     $ 2,454       42.8 %
 
                               
Nine months ended
  $ 20,413     $ 17,257     $ 3,156       18.3 %

     Other revenue consists mostly of consulting and implementation fees across all three of our businesses, and with the acquisition of APS we have added revenue associated with stored value cards to this category. Growth in other revenue, both on quarter-over-quarter and year-over-year bases, has been positively impacted by the acquisition of HelioGraph in the quarter ended December 31, 2003, and the acquisition of APS in the quarter ended June 30, 2004. License sales in our more traditional reconciliation and ACH businesses have generated growth in implementation services in fiscal 2005.

                                 
Cost of Processing, Servicing and Support (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $ 72,745       38.0 %   $ 60,732       39.1 %
 
                               
Nine months ended
  $ 220,795       39.8 %   $ 180,818       40.5 %

     Cost of processing, servicing and support, as a percentage of revenue, has improved by about one percent, both quarter-over-quarter and year-over-year. In Electronic Commerce, our electronic payment rate has improved from 78% as of March 31, 2004, to 83% as of March 31, 2005. Electronic payments carry a significantly lower variable cost per unit than paper-based payments and are far less likely to result in costly customer care claims. The acquisition of APS brought with it a significant number of exclusively electronic payment transactions, accounting for about three points of the five percentage point increase we experienced in our electronic payment rate, year-over-year. In addition to leveraging a significant fixed-cost processing infrastructure, we continue to focus investments on additional efficiency and quality improvements through Six-Sigma based improvements in our customer care processes and information technology infrastructure in order to drive improvement in our cost per transaction. These drivers of expense efficiency were offset somewhat by two factors over the past year. First, the gross margin of our walk-in bill payment business is less than the remainder of our electronic billing and payment business. Second, in the quarter ended September 30, 2004, we incurred a charge of approximately $2.6 million to provide for an anticipated loss in a services engagement with a large customer in our Software business. The charge was reduced by about $1.0 million in the quarter ended March 31, 2005, as we needed less time than originally expected to complete the work. The net charge was about $1.6 million during the nine month period ending March 31, 2005.

     On an absolute dollar basis, growth in cost of processing, servicing and support, both quarter-over-quarter and year-over-year, was driven by growth in transactions processed and e-Bills delivered in our Electronic Commerce business, increased portfolios managed in our Investment Services business and the previously mentioned contract loss in our Software business.

                                 
Research and Development (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $ 20,769       10.9 %   $ 17,199       11.1 %
 
                               
Nine months ended
  $ 60,321       10.9 %   $ 48,204       10.8 %

     Including capitalized development costs of $0.4 million for the quarter ended March 31, 2005, and $0.6 million for the quarter ended March 31, 2004, gross expenditures for research and development were $21.2 million, or 11.1% of total revenue, for the quarter ended March 31, 2005, and were $17.8 million, or 11.5% of total revenue, for the quarter ended March 31, 2004. Including capitalized development costs of $1.4 million for the nine-month period ended March 31, 2005, and $2.3 million for the nine-month period ended March 31, 2004, gross expenditures for research and development were $61.7 million, or 11.1% of total revenue, for the nine-month period ended March 31, 2005, and $50.5 million, or 11.3% of total revenue, for the nine-month period ended March 31, 2004.

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Our acquisitions of APS and HelioGraph have added a moderate level of research and development spending and we have had a particular emphasis on research and development in our Investment Services business as we are in the process of a rewrite of our processing system. We continue to invest heavily in product enhancement and productivity improvement initiatives across all of our businesses as evidenced by the relatively consistent levels of research and development costs as a percent of revenue both quarter-over-quarter and year-over-year.

                                 
Sales and Marketing (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $ 16,838       8.8 %   $ 13,126       8.5 %
 
                               
Nine months ended
  $ 47,346       8.5 %   $ 38,657       8.7 %

     Sales and marketing costs, as a percentage of total revenue, have remained fairly consistent both quarter-over-quarter and year-over-year. The acquisitions of APS and HelioGraph during fiscal 2004 have provided added sales and marketing costs, driving the majority of the increases on an absolute dollar basis. Additionally, we are providing additional resources in support of all of our business segments.

                                 
General and Administrative (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $ 15,469       8.1 %   $ 12,413       8.0 %
 
                               
Nine months ended
  $ 43,934       7.9 %   $ 35,608       8.0 %

     Incremental general and administrative costs, on an absolute dollar basis, have resulted primarily from facilities and other non-redundant expenses related to our acquisitions of APS and HelioGraph. Additionally, we are experiencing increasing quarterly Sarbanes-Oxley Section 404 compliance costs as we prepare for our first internal controls certification as of June 30, 2005. We continue to expect our general and administrative costs to run at about 8% of revenue and are managing these costs accordingly.

                                 
Depreciation and Amortization (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $ 43,593       22.8 %   $ 42,381       27.2 %
 
                               
Nine months ended
  $ 131,253       23.7 %   $ 135,378       30.3 %

     Depreciation and amortization expense has increased by $1.2 million quarter-over-quarter primarily due to the amortization of intangible assets associated with the acquisitions of APS and HelioGraph, more than offsetting the drop in amortization associated with intangible assets that fully amortized since March 31, 2004. On a year-over-year basis, the drop in amortization associated with fully amortized intangible assets has more than offset the increase in amortization associated with intangible assets recorded as a result of the acquisitions of APS and HelioGraph. Depreciation expense associated with tangible assets remained essentially flat on quarter-over-quarter and year-over-year bases.

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In-Process Research & Development (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $           $        
 
                               
Nine months ended
  $           $ 324        

     We recorded immaterial research and development costs totaling $0.3 million related to our acquisition of HelioGraph in the quarter ended December 31, 2003.

                                 
Equity in Net Loss of Joint Venture (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $ (823 )     (0.4 )%   $        
 
                               
Nine months ended
  $ (2,170 )     (0.4 )%   $        

     In April 2004, we announced a joint venture, OneVu Limited (“OneVu”), with Voca Limited (“Voca”), designed to create an integrated electronic billing and payment network for billers and banks in the United Kingdom. We account for the joint venture on the equity basis of accounting and the equity in the net loss of the joint venture represents our portion of the loss incurred by the joint venture during the indicated periods. The joint venture is still in its formative stage and, therefore, we do not expect it to become profitable in the foreseeable future.

                                 
Interest Income (Expense), Net (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended:
                               
Interest income
  $ 2,427             $ 1,243          
Interest expense
    (284 )             (145 )        
 
                           
Interest income, net
  $ 2,143       1.1 %   $ 1,098       0.7 %
 
                           
 
                               
Nine months ended:
                               
Interest income
  $ 6,144             $ 4,554          
Interest expense
    (815 )             (5,824 )        
Call premium expense
                  (4,813 )        
Unamortized note issuance cost
                  (2,407 )        
 
                           
Interest income (expense), net
  $ 5,329       1.0 %   $ (8,490 )     (1.9 )%
 
                           

     On a quarter-over-quarter basis, strong free cash flow growth has resulted in a significant increase in average cash and invested assets. Combined with rising interest rates, our yield on investments has resulted in an increase in interest income from $1.2 million in the quarter ended March 31, 2004, to $2.4 million in the quarter ended March 31, 2005. Interest income in the quarter ended March 31, 2005, included approximately $0.3 million related to a sales tax rebate program from assets purchased in prior years, providing interest unrelated to invested assets. On a quarter-over-quarter basis, interest expense has increased by approximately $0.1 million due to an increase in leased assets over the past year.

     On a year-over-year basis, free cash flow growth was offset by the purchase of APS for $112.3 million in cash in the June 2004 quarter, resulting in a moderate decrease in average cash and invested assets. The impact of the decrease in average invested assets was offset by the positive impact of rising interest rates, resulting in greater investment yield. The net result of these two factors was an increase in interest income from $4.6 million for the nine months ended March 31, 2004, to $6.1 million for the nine months ended March 31, 2005.

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Additionally, through the nine months ended March 31, 2005, we received approximately $0.8 million of interest associated with a sales tax rebate program from assets purchased in prior years, providing interest unrelated to invested assets. Interest expense decreased significantly, from $5.8 million for the nine months ended March 31, 2004, to $0.8 million for the nine months ended March 31, 2005, due primarily to the reduced interest expense upon redemption of our $172.5 million 6.5% convertible notes on December 12, 2003. Additionally, as a result of the redemption, we incurred a charge of $4.8 million for a 2.79% call premium for early redemption of the notes, and an additional $2.4 million charge to write off the remaining unamortized note issuance cost.

                                 
Gain on Investments (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $ 592       0.3 %   $        
 
                               
Nine months ended
  $ 592       0.1 %   $        

     In the quarter ended March 31, 2005, we recorded a $0.6 million gain on the sale of stock. While we do not typically invest in equity securities, we received shares of stock from an insurance vendor that demutualized. We sold the shares shortly after we received them, and recorded the proceeds as a gain on investments.

                                 
Income Tax Expense (Benefit) (000’s)   March 31,  
    2005     2004  
            Effective             Effective  
    $     Rate     $     Rate  
Three months ended
  $ 8,112       34.2 %   $ 2,789       26.6 %
 
                               
Nine months ended
  $ 20,055       36.5 %   $ (172 )     16.5 %

     Our federal statutory tax rate is 35%, and our overall blended statutory tax rate (federal, state and foreign combined) approaches 39% without the benefit of tax planning strategies. For the nine-month period ended March 31, 2005, our effective tax rate was lower due to research and experimentation tax credits, tax free municipal interest income and foreign tax credits recorded in the fiscal year. The effective rate for the three months ended March 31, 2005 was even lower, as we recorded a cumulative catch up adjustment in the quarter to achieve the correct effective rate on a year to date basis to reflect tax planning strategies we implemented earlier in the fiscal year. For the three- and nine-month periods ended March 31, 2004, our effective tax benefit was offset by federal alternative minimum taxes and the temporary suspension of state-level net operating loss carryover credits.

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Segment Information

     We evaluate the performance of our segments based on revenues and operating income (loss) of the respective segments. Segment operating income (loss) excludes acquisition related intangible asset amortization related to various business and asset acquisitions and significant one-time charges. The following table sets forth revenue and operating income by segment, for the periods noted:

                                 
    Three Months Ended     Nine Months Ended  
    March 31,     March 31,  
    2005     2004     2005     2004  
            (in thousands)          
Revenues:
                               
Electronic Commerce
  $ 147,581     $ 115,181     $ 427,896     $ 334,224  
Investment Services
    24,043       21,546       70,858       63,304  
Software
    19,596       18,511       56,055       48,910  
 
                       
Total revenues
  $ 191,220     $ 155,238     $ 554,809     $ 446,438  
 
                       
 
                               
Segment operating income (loss):
                               
Electronic Commerce
  $ 54,034     $ 41,001     $ 151,864     $ 113,884  
Investment Services
    4,837       4,485       13,021       14,011  
Software
    6,067       4,554       13,369       10,347  
Corporate
    (10,001 )     (8,584 )     (27,537 )     (25,807 )
 
                               
Purchase accounting amortization:
                               
Electronic Commerce
    (32,559 )     (31,007 )     (97,681 )     (101,577 )
Investment Services
    (151 )     (205 )     (453 )     (668 )
Software
    (421 )     (857 )     (1,423 )     (2,417 )
Write off of in-process research and development costs — Software
                      (324 )
 
                       
Total income from operations
  $ 21,806     $ 9,387     $ 51,160     $ 7,449  
 
                       

Electronic Commerce Segment Information:

                                 
Electronic Commerce Revenues (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 147,581     $ 115,181     $ 32,400       28.1 %
 
                               
Nine months ended
  $ 427,896     $ 334,224     $ 93,672       28.0 %

     Revenue growth in Electronic Commerce was primarily the result of an increase in transactions processed, including those added by our walk-in bill payment business, an increase in e-Bills distributed, and an increase in revenue from interest-sensitive products, such as ABT, somewhat offset by volume-based price discounts.

     We offer two basic levels of electronic billing and payment services to our customers — a “Full Service” offering and a “Payment Services” offering. Customers that use our Full Service offering generally outsource their electronic billing and payment process to us. A Full Service customer may or may not use a CheckFree-hosted user interface, but uses a broad array of services, including payment processing, payment warehouse, claims processing, e-Bill, online proof of payment, various levels of customer care, and other aspects of our service. Also, while a Full Service customer may have its own payment warehouse, we maintain a customer record and payment history within our payment warehouse to support the Full Service customer’s servicing needs. Customers in the Full Service category may contract to pay us either on a per-subscriber basis, a per-transaction basis, or a blend of both. The distinction between Full Service and Payment Services is based solely on the types of service the customer receives, not on our pricing methodology. Customers that utilize our Payment Services offering receive a limited subset of our electronic billing and payment services, primarily remittance processing, including our newly acquired walk-in bill payment business. Additionally, within Payment Services, we provide services to billers for electronic bill delivery, biller direct hosting and payments, as well as other payment services, such as ABT.

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A third category of revenue we simply refer to as “Other Electronic Commerce” includes our Health and Fitness business and other ancillary revenue sources, such as consumer service provider and biller implementation and consulting services and fees associated with the issuance of stored value cards.

     The following table provides a historical trend of revenues, underlying transaction metrics, and subscriber metrics, where appropriate, for our Electronic Commerce business over the periods presented:

                                                 
    Three Months Ended  
    3/31/05     12/31/04     9/30/04     3/31/04     12/31/03     9/30/03  
    (In millions)  
Full Service
                                               
Revenues
  $ 106.4     $ 102.4     $ 99.1     $ 94.0     $ 91.8     $ 85.5  
Active Subscribers
    7.4       6.9       6.4       5.5       5.0       4.6  
Transactions processed
    153.6       142.9       133.5       115.5       106.1       94.3  
 
                                               
Payment Services
                                               
Revenues
  $ 32.4     $ 31.3     $ 30.5     $ 12.8     $ 12.0     $ 11.9  
Transactions processed
    80.8       76.5       72.3       36.7       33.1       32.4  
 
                                               
Other Electronic Commerce
                                               
Revenues
  $ 8.8     $ 8.4     $ 8.6     $ 8.4     $ 8.7     $ 9.2  
 
                                               
Totals
                                               
Electronic Commerce revenues
  $ 147.6     $ 142.1     $ 138.2     $ 115.2     $ 112.5     $ 106.6  
Transactions processed
    234.4       219.4       205.8       152.2       139.2       126.7  

     The primary driver behind the increase in Full Service revenue from $94.0 million for the quarter ended March 31, 2004, to $106.4 million for the quarter ended March 31, 2005, was 33% growth in Full Service transactions processed from 115.5 million for the quarter ended March 31, 2004, to 153.6 million for the quarter ended March 31, 2005. The impact of transaction growth was offset by general volume-based pricing tier discounts and particularly by a December 2003 revision to our contract with our largest customer, Bank of America, where subscriber pricing was replaced with transaction-based pricing including volume discounts commensurate with this customer’s volume. Since the quarter ended March 31, 2004, Full Service revenue per transaction has declined from $0.81 to $0.69 as of March 31, 2005.

     Payment Services revenue has increased substantially, from $12.8 million for the quarter ended March 31, 2004, to $32.4 million for the quarter ended March 31, 2005. In addition to continued growth in transactions processed from our existing customer base, the primary driver of the increase in revenue has been our acquisition of APS on June 22, 2004. This walk-in bill payment business contributed significant transaction volume at a revenue per transaction rate substantially higher than our core Payment Services business. The addition of APS can be seen clearly in the increase in both revenue and transactions processed beginning in the quarter ended September 30, 2004, in the historical trends above.

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Electronic Commerce Operating Income (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 54,034     $ 41,001     $ 13,033       31.8 %
 
                               
Nine months ended
  $ 151,864     $ 113,884     $ 37,980       33.3 %

     Our ratio of electronic payments to total payments improved from 78% as of March 31, 2004, to 83% as of March 31, 2005. Electronic payments carry a significantly lower variable cost per unit than paper payments and are far less likely to result in a costly customer care inquiry or claim. Due to continued improvement in quality and efficiency and the leverage we have experienced in our existing fixed cost base, we have realized a significant reduction in cost per transaction over the past year, which resulted in an increase in operating income. Despite our new walk-in bill payments operation providing a relatively low operating margin, the overall operating margin in our Electronic Commerce business has increased from 36% for the quarter ended March 31, 2004, to 37% for the quarter ended March 31, 2005, and from 34% for the nine months ended March 31, 2004, to 35% for the nine months ended March 31, 2005.

Investment Services Segment Information:

                                 
Investment Services Revenues (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 24,043     $ 21,546     $ 2,497       11.6 %
 
                               
Nine months ended
  $ 70,858     $ 63,304     $ 7,554       11.9 %

     Quarter-over-quarter and year-over-year revenue growth in Investment Services was driven primarily by an increase in portfolios managed from about 1.5 million as of March 31, 2004, to approximately 1.8 million as of March 31, 2005. We have provided certain incentives for customers to sign multi-year contracts and are experiencing a mix shift toward lower priced services, both of which we expect to result in lower revenue per average portfolio managed. Growth in portfolios managed is typically tied to the growth in the U.S. stock market. We have experienced renewed growth in portfolios, and as a result, we are cautiously optimistic about continued near-term portfolio growth.

                                 
Investment Services Operating Income (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 4,837     $ 4,485     $ 352       7.8 %
 
                               
Nine months ended
  $ 13,021     $ 14,011     $ (990 )     (7.1 )%

     Our operating margin remained fairly consistent, from 21% for the quarter ended March 31, 2004, to 20% for the quarter ended March 31, 2005. We are investing heavily in an enhanced version of our operating system in our Investment Services business, which has caused our margins to lag historical levels.

     Our operating margin has declined from 22% for the nine-month period ended March 31, 2004, to approximately 18% for the nine-month period ended March 31, 2005, due primarily to additional spending on the enhanced operating system project, and an investment in resources designed to improve future operational quality standards through Six Sigma quality programs. We expect our future margin to average approximately 20% until completion of the enhanced version of the operating system expected in the next 15 to 21 months.

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Software Segment Information:

                                 
Software Revenues (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 19,596     $ 18,511     $ 1,085       5.9 %
 
                               
Nine months ended
  $ 56,055     $ 48,910     $ 7,145       14.6 %

     In addition to incremental maintenance and services revenue provided from our acquisition of HelioGraph in the quarter ended December 31, 2003, we have experienced moderate license revenue growth on a year-over-year basis. We believe this to be the result of improved execution within our Software division. It is too early to determine whether the growth experienced in the first nine months of fiscal 2005 is sustainable in the near-term.

                                 
Software Operating Income (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 6,067     $ 4,554     $ 1,513       33.2 %
 
                               
Nine months ended
  $ 13,369     $ 10,347     $ 3,022       29.2 %

     The increase in quarter-over-quarter operating income is due to revenue growth and a reduction of a loss contract reserve of approximately $1.0 million in the quarter ended March 31, 2005. The increase in year-over-year operating income is dampened somewhat by a net charge of about $1.6 million due to a loss on a services contract for a large customer.

Corporate Segment Information:

                                 
Corporate Operating Loss (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ (10,001 )   $ (8,584 )   $ (1,417 )     (16.5 )%
 
                               
Nine months ended
  $ (27,537 )   $ (25,807 )   $ (1,730 )     (6.7 )%

     Corporate results represent costs for legal, human resources, finance and various other unallocated overhead expenses. We have been able to leverage our infrastructure costs by limiting additional corporate costs primarily to increased regulatory compliance costs.

Purchase Accounting Amortization:

                                 
Purchase Accounting Amortization Expense (000’s)   March 31,     Change  
    2005     2004     $     %  
Three months ended
  $ 33,131     $ 32,069     $ 1,062       3.3 %
 
                               
Nine months ended
  $ 99,557     $ 104,662     $ (5,105 )     (4.9 )%

     Purchase accounting amortization represents amortization of intangible assets resulting from our various acquisitions from 1998 forward. On a quarter-over-quarter basis, the increase in purchase accounting amortization is due to the recording of intangible assets associated with our acquisitions of APS and HelioGraph. The decrease in year-over-year purchase accounting amortization is the result of older intangible assets that have fully amortized since the quarter ended March 31, 2004.

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In-Process Research & Development (000’s)   March 31,  
    2005     2004  
            %             %  
    $     Revenue     $     Revenue  
Three months ended
  $           $        
 
                               
Nine months ended
  $           $ 324        

     We recorded immaterial research and development costs totaling $0.3 million related to our acquisition of HelioGraph in the quarter ended December 31, 2003.

Inflation

     We believe the effects of inflation have not had a significant impact on our results of operations.

Liquidity and Capital Resources

     The following chart summarizes our Consolidated Statement of Cash Flows for the three- and nine-month periods ended March 31, 2005:

                 
    Three     Nine  
    Months     Months  
    Ended     Ended  
    March 31,     March 31,  
    2005     2005  
    (in thousands)  
Net cash provided by (used in):
               
Operating activities
  $ 61,564     $ 159,099  
Investing activities
    (152,820 )     (192,840 )
Financing activities
    5,362       9,597  
Effect of exchange rates on cash and cash equivalents
    (198 )     859  
 
           
Net decrease in cash and cash equivalents
  $ (86,092 )   $ (23,285 )
 
           

     As of March 31, 2005, we had $347.6 million of cash, cash equivalents and short-term investments on hand, and an additional $67.4 million in long-term investments. Our balance sheet reflects a current ratio of 2.9 and working capital of $383.9 million. Due to revenue growth and processing efficiency improvement, we have experienced a significant increase in net cash provided by operating activities over the past several years. We fully utilized our federal net operating loss carryover credits late in the quarter ended September 30, 2004, and as a result, we are now a full federal taxpayer. Despite having to pay full federal income taxes, we generated $61.6 million of net cash provided by operating activities during the three months ended March 31, 2005, and we expect to generate about $220 million of net cash provided by operating activities in the fiscal year ending June 30, 2005. Considering our existing cash and investment balances and expectations of net cash provided by operating activities for the remainder of the year, we believe we will have sufficient cash to meet our presently anticipated requirements for the foreseeable future. Our board of directors has approved up to $40 million for the purpose of repurchasing shares of our common stock through August 2005. As of March 31, 2005, no such purchases have taken place. To the extent we require additional cash, we have access to an untapped $185 million revolving credit facility. We have no immediate plans to borrow against the credit facility.

     From an investing perspective, we used $192.8 million of cash during the nine-month period ended March 31, 2005. Of this amount, we used $162.1 million in the net purchases of investments, $24.3 million in capital expenditures, $3.1 million in the working capital adjustments associated with acquisitions, $1.9 million for an investment in our United Kingdom-based joint venture, OneVu, and $1.4 million in the capitalization of software development costs. We expect to spend between $35 million and $40 million on purchases of property and equipment in fiscal 2005.

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     From a financing perspective, we generated $9.6 million of cash for the nine-month period ended March 31, 2005. Proceeds of $8.6 million from exercised employee stock options and $3.4 million from our Associate Stock Purchase Plan were offset by $2.4 million of payments for capital leases and other long-term obligations.

     While the timing of cash payments and collections will cause working capital fluctuations from quarter to quarter and the level of expected capital expenditures could change, we expect to generate about $180 million of free cash flow for the fiscal year ending June 30, 2005. We define free cash flow as net cash provided by operating activities, exclusive of the net change in settlement accounts, less capital expenditures. See “Use of Non-GAAP Financial Information” below for a discussion of this measure.

     Our agreement to use a bank routing number to process payments contains certain financial covenants related to tangible net worth, cash flow coverage, debt service coverage and maximum levels of debt to cash flow, as defined. We are in compliance with all covenants as of March 31, 2005, and do not anticipate any change in the foreseeable future.

Use of Non-GAAP Financial Information

     We supplement our reporting of cash flow information determined in accordance with GAAP (Generally Accepted Accounting Principles in the United States of America) by using “free cash flow” in this Quarterly Report on Form 10-Q as a measure to evaluate our liquidity. We define free cash flow as GAAP net cash provided by operating activities, exclusive of the net change in settlement accounts and less capital expenditures. We believe free cash flow provides useful information to management and investors in understanding our financial results and assessing our prospects for future performance. We also use free cash flow as a factor in determining long-term incentive compensation for senior management.

     We exclude the net change in settlement accounts from free cash flow because we believe this facilitates management’s and investors’ ability to analyze operating cash flow trends. In connection with our walk-in bill payment business, our balance sheet reflects settlement assets and settlement obligations. The settlement assets represent payment receipts in transit to us from agents, and the settlement obligations represent scheduled but unpaid payments due to billers. Balances in settlement accounts fluctuate daily based on deposit timing and payment transaction volume. These timing differences are not reflective of our liquidity, and thus, we exclude the net change in settlement accounts from free cash flow.

     As a technology company, we make significant capital expenditures in order to update our technology and to remain competitive. Our free cash flow reflects the amount of cash we generated that remains, after we have met those operational needs, for the evaluation and execution of strategic initiatives such as acquisitions, stock and/or debt repurchases and other investing and financing activities, including servicing additional debt obligations.

     Free cash flow does not solely represent residual cash flow available for discretionary expenditures, as certain of our non-discretionary obligations are also funded out of free cash flow. These consist primarily of payments on capital leases and other long-term commitments, if any, as reflected in the table entitled “Contractual Obligations” in the “Liquidity and Capital Resources” section of “Management’s Discussion and Analysis of Financial Condition and Results of Operations” contained in our Annual Report on Form 10-K for the fiscal year ended June 30, 2004, which was filed with the Securities and Exchange Commission on September 3, 2004, and in our Quarterly Report on Form 10-Q for the quarter ended September 30, 2004, which was filed with the Securities and Exchange Commission on November 9, 2004.

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     Our free cash flow for the three- and nine-month periods ended March 31, 2005 and March 31, 2004, is calculated as follows (in thousands):

                                 
    Three Months Ended     Nine Months Ended  
    March 31,     March 31,  
    2005     2004     2005     2004  
Net cash provided by operating activities
  $ 61,564     $ 48,824     $ 159,099     $ 117,200  
Excluding: Net change in settlement accounts
    (1,498 )           (70 )      
Less:          Capital expenditures
    (10,214 )     (7,814 )     (24,331 )     (16,893 )
 
                       
Free cash flow
  $ 49,852     $ 41,010     $ 134,698     $ 100,307  
 
                       

     Net cash provided by (used in) investing activities for the three-month periods ending March 31, 2004, and March 31, 2005, was $4.0 million and $(152.8) million, respectively. Net cash provided by financing activities was $3.2 million for the three months ended March 31, 2004, and was $5.4 million for the three months ended March 31, 2005. Net cash provided by (used in) investing activities for the nine-month periods ending March 31, 2004, and March 31, 2005, was $3.6 million and $(192.8) million, respectively. Net cash provided by (used in) financing activities was $(167.5) million for the nine months ended March 31, 2004, and was $9.6 million for the nine months ended March 31, 2005.

     Our free cash flow should be considered in addition to, and not as a substitute for, net cash provided by operating activities or any other amount determined in accordance with GAAP. Further, our measure of free cash flow may not be comparable to similar titled measures reported by other companies.

Recent Accounting Pronouncements

     In December 2004, the Financial Accounting Standards Board issued a revision to Financial Accounting Standards Board (“FASB”) Statement No. 123, “Accounting for Stock Based Compensation” (“SFAS 123”). FASB Statement No. 123 (R), “Share-Based Payment” (“SFAS 123 (R)”), supersedes APB Opinion No. 25, “Accounting for Stock Issued to Employees,” and its related implementation guidance. SFAS 123 (R) establishes standards for the accounting for transactions in which an entity exchanges its equity instruments for goods or services. It also addresses transactions in which an entity incurs liabilities in exchange for goods or services that are based on the fair value of the entity’s equity instruments or that may be settled by the issuance of those equity instruments. SFAS 123 (R) focuses primarily on accounting for transactions in which an entity obtains employee services in share-based payment transactions. This Statement does not change the accounting guidance for share-based payment transactions with parties other than employees provided in SFAS 123 as originally issued and EITF Issue No. 96-18, “Accounting for Equity Instruments That Are Issued to Other Than Employees for Acquiring, or in Conjunction with Selling, Goods or Services.” SFAS 123 (R) does not address the accounting for employee share ownership plans, which are subject to AICPA Statement of Position 93-6, “Employers’ Accounting for Employee Stock Ownership Plans.”

     Based on the guidance of SFAS 123 (R), we will be required to initially measure the cost of employee services received in exchange for an award of liability instruments (i.e., awards settled in cash rather than equity) based on its current fair value; the fair value of that award will be re-measured subsequently at each reporting date through the settlement date. Changes in fair value during the requisite service period will be recognized as compensation cost over that period. For equity settled awards, we will be required to estimate the grant-date fair value of employee share options and similar instruments expected to ultimately be issued to employees using option-pricing models adjusted for the unique characteristics of those instruments (unless observable market prices for the same or similar instruments are available). Based on the grant date fair value calculated, we will be required to amortize the cost of such award over the requisite service period.

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     Under our Associate Stock Purchase Plan as currently defined, the shares purchased by our employees on June 30 and December 31 of each year would be required to be recorded at fair value within our financial statements under the guidance of SFAS 123 (R) as our Plan currently offers a look-back feature as well as a discount in excess of 5% on the fair market value at the date of the purchase.

     Excess tax benefits, as defined by SFAS 123 (R), will be recognized as an addition to paid-in-capital. Cash retained as a result of those excess tax benefits will be presented in the statement of cash flows as financing cash inflows. The write-off of deferred tax assets relating to unrealized tax benefits associated with recognized compensation cost will be recognized as income tax expense unless there are excess tax benefits from previous awards remaining in paid-in capital to which it can be offset.

     On April 14, 2005, the SEC announced the adoption of a new rule that amended the compliance date of SFAS 123(R). The new rule allows companies to implement SFAS 123(R) at the beginning of the next fiscal year, instead of the next reporting period, beginning after June 15, 2005. For us, the amended effective date did not delay our adoption date. As a result, we will adopt this Statement in the first quarter of our 2006 fiscal year (quarter ending September 30, 2005) using the modified prospective method and are currently evaluating the impact that the adoption of SFAS 123 (R) will have on our financial statements.

     In December 2004, the FASB issued FASB Statement No. 153, “Exchanges of Nonmonetary Assets” (“SFAS 153”). This Statement addresses the measurement of exchanges of nonmonetary assets. The guidance in APB Opinion No. 29, “Accounting for Nonmonetary Transactions” (“APB 29”), is based on the principle that exchanges of nonmonetary assets should be measured based on the fair value of the assets exchanged. The guidance in APB 29, however, included certain exceptions to that principle. SFAS 153 amends APB 29 to eliminate the exception for nonmonetary exchanges of similar productive assets and replaces it with a general exception for exchanges of nonmonetary assets that do not have commercial substance. A nonmonetary exchange has commercial substance if the future cash flows of the entity are expected to change significantly as a result of the exchange. This Statement is effective for financial statements for fiscal years beginning after June 15, 2005. Earlier application is permitted for nonmonetary asset exchanges incurred during fiscal years beginning after the date of this Statement is issued. We do not believe that the adoption of this statement will have a significant impact on our financial statements.

     FASB Statement No. 131, “Disclosures about Segments of an Enterprise and Related Information” (“SFAS 131”), requires that a public company separately report the financial and descriptive information about its reportable operating segments. Paragraph 17 of SFAS 131 sets forth the aggregation criteria used to determine whether an operating segment that does not otherwise meet the quantitative thresholds to be a reportable segment may be aggregated in accordance with paragraph 19 of SFAS 131. EITF Issue 04-10 “Determining Whether to Aggregate Operating Segments That Do Not Meet the Quantitative Thresholds” (“EITF 04-10”), addresses the criteria for aggregating operating segments.

     We currently report our financial and operating results according to our four primary business segments (Electronic Commerce, Investment Services, Software, and Corporate). The financial and operating results for at least one of those primary business segments are comprised of one or more smaller business units that have been aggregated. Based upon our analysis of our current operations, we believe that such aggregations meet the criteria for aggregation under EITF 04-10 and paragraph 17 of SFAS 131. We will continue to monitor any changes in the nature and operations of each of our business segments and modify our method of aggregation as appropriate in order to remain in compliance with EITF 04-10 and SFAS 131.

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Application of Critical Accounting Policies

     The preparation of financial statements in conformity with GAAP requires us to make estimates and assumptions that affect the reported amounts of assets and liabilities and disclosures of contingent assets and liabilities at the date of the financial statements and the reported amounts of revenues and expenses during the reporting period. Critical accounting policies are those policies that are both important to the portrayal of our financial conditions and results of operations, and they require our most difficult, subjective or complex judgments, often as a result of the need to make estimates about the effect of matters that are inherently uncertain. In our Annual Report on Form 10-K for the fiscal year ended June 30, 2004, as filed with the Securities and Exchange Commission on September 3, 2004, we described the policies and estimates relating to intangible assets, equity instruments issued to customers and deferred income taxes as our critical accounting policies, and since then, we have made no changes to our reported critical accounting policies.

Safe Harbor Statement Under the Private Securities Litigation Reform Act of 1995

     Except for the historical information contained herein, the matters discussed in this Quarterly Report on Form 10-Q include certain forward-looking statements within the meaning of Section 27A of the Securities Act of 1933, as amended, and Section 21E of the Securities Exchange Act of 1934, as amended, which are intended to be covered by the safe harbors created thereby. Those statements include, but may not be limited to, all statements regarding our and management’s intent, belief and expectations, such as statements concerning our future profitability and our operating and growth strategy. Words such as “believe,” “anticipate,” “expect,” “will,” “may,” “should,” “intend,” “plan,” “estimate,” “predict,” “potential,” “continue,” “likely” and similar expressions are intended to identify forward-looking statements. Investors are cautioned that all forward-looking statements contained in this Quarterly Report on Form 10-Q and in other statements we make involve risks and uncertainties including, without limitation, the factors set forth under the caption “Business – Business Risks” included in our Annual Report on Form 10-K for the year ended June 30, 2004, and other factors detailed from time to time in our other filings with the Securities and Exchange Commission. One or more of these factors have affected, and in the future could affect our businesses and financial results in the future and could cause actual results to differ materially from plans and projections. Although we believe that the assumptions underlying the forward-looking statements contained herein are reasonable, any of the assumptions could be inaccurate. Therefore, there can be no assurance that the forward-looking statements included in this Quarterly Report on Form 10-Q will prove to be accurate. In light of the significant uncertainties inherent in the forward-looking statements included herein, the inclusion of such information should not be regarded as a representation by us or any other person that our objectives and plans will be achieved. All forward-looking statements made in this Quarterly Report on Form 10-Q are based on information presently available to our management. We assume no obligation to update any forward-looking statements.

Recent Developments

     Acquisition of Accurate Software. On April 30, 2005, we completed the acquisition of Accurate Software Limited, a United Kingdom-based provider of reconciliation, exception management, workflow and business intelligence solutions for approximately $56 million in cash. Accurate Software Limited will become a part of our Software Division to further solidify our leadership in financial software and services, expand our global presence and client base, and drive continued product innovation in operational risk management solutions for banks, securities firms and corporations.

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Item 3. Quantitative and Qualitative Disclosures About Market Risk

     We now maintain multiple offices in the United Kingdom and Canada. As a result, we have assets and liabilities outside the United States that are subject to fluctuations in foreign currency exchange rates. We utilize pounds sterling as the functional currency for the United Kingdom, and the Canadian dollar as the functional currency for Canada. Due to the relatively immaterial nature of the amounts involved, our economic exposure from fluctuations in foreign exchange rates is not significant enough at this time to engage in forward foreign exchange contracts and other similar instruments.

     Our international sales contributed less than three percent of our revenue for the nine months ended March 31, 2005. We market, sell and license our products throughout the world. As a result, our future revenue could be affected by weak economic conditions in foreign markets that could reduce demand for our products.

     Our exposure to interest rate risk includes the yield we earn on invested cash, cash equivalents and investments and interest-based revenue earned on products such as our ABT product. Our outstanding lease obligations carry fixed interest rates.

     As part of processing certain types of transactions, we earn interest from the time money is collected from our customers until the time payment is made to merchants. These revenues, which are generated from trust account balances not included in our consolidated balance sheet, are included in processing and servicing revenue. We use derivative financial instruments to manage the variability of cash flows related to this interest rate-sensitive portion of processing and servicing revenue. Accordingly, we enter into interest rate swaps to effectively fix the interest rate on a portion of our interest rate-sensitive revenue. As of March 31, 2005, we have entered into interest rate swap transactions totaling $125 million.

     The swaps are designated as cash flow hedges, and they are recorded on our balance sheet at fair value. Because of the high degree of effectiveness between the interest rate swaps and underlying interest rate-sensitive revenue, fluctuations in the fair value of the swaps are generally offset by the changes resulting from the variability of cash flows from the underlying interest rate sensitive revenue. A 1% increase in interest rates would decrease the fair value of derivatives by about $1.5 million. Such decline in the fair value of the swap would offset the increase in the cash flows of the underlying hedged interest rate sensitive revenue of 100 basis points.

     Our investment policy does not allow us to enter into derivative financial instruments for speculative or trading purposes. We maintain a system of internal controls that includes policies and procedures covering the authorization, reporting and monitoring of derivative activity. Further, the policy allows us to enter into derivative contracts only with counter-parties that meet certain credit rating and/or financial stability criteria. The counter-parties to these contracts are major financial institutions, and we believe the risk of loss is remote.

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Item 4. Controls and Procedures

     Disclosure Controls and Procedures. Disclosure controls and procedures are controls and other procedures that are designed to ensure that information required to be disclosed by us in the reports that we file or submit under the Securities Exchange Act of 1934, as amended (the “Exchange Act”) is recorded, processed, summarized and reported, within the time periods specified in the SEC’s rules and forms. Disclosure controls and procedures include, without limitation, controls and procedures designed to ensure that information we are required to disclose in the reports that we file or submit under the Exchange Act is accumulated and communicated to our management as appropriate to allow timely decisions regarding required disclosure.

     As of end of the period covered by this report, our management, with the participation of our chief executive officer and chief financial officer, carried out an evaluation of the effectiveness of our disclosure controls and procedures pursuant to Rule 13a-15 promulgated under the Exchange Act. Based upon this evaluation, our chief executive officer and our chief financial officer concluded that our disclosure controls and procedures were (1) designed to ensure that material information relating to our company is accumulated and made known to our management, including our chief executive officer and chief financial officer, in a timely manner, particularly during the period in which this report was being prepared and (2) effective, in that they provide reasonable assurance that information we are required to disclose in the reports that we file or submit under the Exchange Act is recorded, processed, summarized and reported within the time periods specified in the SEC’s rules and forms.

     Management believes, however, that a controls system, no matter how well designed and operated, cannot provide absolute assurance that the objectives of the controls system are met, and no evaluation of controls can provide absolute assurance that all control issues and instances of fraud, if any, within a company have been detected.

     Internal Controls. There has been no change in our internal control over financial reporting (as defined in Rules 13a-15(f) and 15d-15(f) promulgated under the Exchange Act) during our fiscal quarter ended March 31, 2005, that has materially affected, or is reasonably likely to materially affect, our internal control over financial reporting.

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PART II. OTHER INFORMATION

Item 6. Exhibits

     
Exhibit   Exhibit
Number   Description
 
   
31(a)*
  Certification pursuant to Exchange Act Rules 13a-14(a) and 15d-14(a) of the Chief Executive Officer.
 
   
31(b)*
  Certification pursuant to Exchange Act Rules 13a-14(a) and 15d-14(a) of the Chief Financial Officer.
 
   
32(a)+
  Certification pursuant to 18 U.S.C. Section 1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, of the Chief Executive Officer.
 
   
32(b)+
  Certification pursuant to 18 U.S.C. Section 1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, of the Chief Financial Officer.


*   Filed with this report.
 
+   Furnished with this report.

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Signatures

     Pursuant to the requirements of the Securities Exchange Act of 1934, the registrant has duly caused this report to be signed on its behalf by the undersigned thereunto duly authorized.
         
  CHECKFREE CORPORATION
 
 
Date: May 9, 2005  By:   /s/ David E. Mangum    
    David E. Mangum, Executive  
    Vice President and Chief Financial Officer*
(Principal Financial Officer) 
 
 
         
     
Date: May 9, 2005  By:   /s/ John J. Browne, Jr.    
    John J. Browne, Jr., Vice President,   
    Controller, and Chief Accounting Officer
(Principal Accounting Officer) 
 
 


*   In his capacity as Executive Vice President and Chief Financial Officer, Mr. Mangum is duly authorized to sign this report on behalf of the Registrant.

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EXHIBIT INDEX

     
Exhibit   Exhibit
Number   Description
 
   
31(a)*
  Certification pursuant to Exchange Act Rules 13a-14(a) and 15d-14(a) of the Chief Executive Officer.
 
   
31(b)*
  Certification pursuant to Exchange Act Rules 13a-14(a) and 15d-14(a) of the Chief Financial Officer.
 
   
32(a)+
  Certification pursuant to 18 U.S.C. Section 1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, of the Chief Executive Officer.
 
   
32(b)+
  Certification pursuant to 18 U.S.C. Section 1350, as adopted pursuant to Section 906 of the Sarbanes-Oxley Act of 2002, of the Chief Financial Officer.


*   Filed with this report.
 
+   Furnished with this report.