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UNITED STATES
SECURITIES AND EXCHANGE COMMISSION
Washington, D.C. 20549

FORM 10-Q


[X] QUARTERLY REPORT PURSUANT TO SECTION 13 OR 15(d)
OF THE SECURITIES EXCHANGE ACT OF 1934
 
For the quarterly period ended March 31, 2005
OR
[   ] TRANSITION REPORT UNDER SECTION 13 OR 15(d)
OF THE SECURITIES EXCHANGE ACT OF 1934
 

For the transition period from                              to                             

Commission file number 000-26534

VION PHARMACEUTICALS, INC.

(Exact name of registrant as specified in its charter)


Delaware 13-3671221
(State or other jurisdiction of incorporation or organization) (I.R.S. Employer Identification No.)
4 Science Park
New Haven, CT
    
06511
(Address of principal executive offices) (Zip Code)

Registrant's telephone number, including area code:   (203) 498-4210

Indicate by check mark whether the registrant (1) has filed all reports required to be filed by Section 13 or 15(d) of the Securities Exchange Act of 1934 during the preceding 12 months (or for such shorter period that the registrant was required to file such reports), and (2) has been subject to such filing requirements for the past 90 days. Yes [X] No [   ]

Indicate by check mark whether the registrant is an accelerated filer (as defined in Rule 12b-2 of the Exchange Act). Yes [X] No [   ]

The number of shares outstanding of the registrant's common stock as of April 29, 2005 was 65,886,904.




VION PHARMACEUTICALS, INC.
TABLE OF CONTENTS

PART I – FINANCIAL INFORMATION


    Page
No.
Item 1. Financial Statements   1  
  Condensed Consolidated Balance Sheets   1  
  Condensed Consolidated Statements of Operations   2  
  Condensed Consolidated Statement of Changes in Shareholders' Equity   3  
  Condensed Consolidated Statements of Cash Flows   4  
  Notes to Condensed Consolidated Financial Statements   5  
Item 2. Management's Discussion and Analysis of Financial Condition and Results of Operations   7  
Item 3. Quantitative and Qualitative Disclosures About Market Risk   13  
Item 4. Controls and Procedures   13  
PART II – OTHER INFORMATION
Item 6. Exhibits   14  
SIGNATURES      

In this report, unless the context otherwise requires, the terms "we," "us," "our," "the Company" and "Vion" refer to Vion Pharmaceuticals, Inc., a Delaware corporation.




PART I

FINANCIAL INFORMATION

ITEM 1. Financial Statements

Vion Pharmaceuticals, Inc.
(A Development Stage Company)

Condensed Consolidated Balance Sheets
(Unaudited)


(In thousands, except share and per share data) March 31,
2005
December 31,
2004
ASSETS
Current Assets:            
Cash and cash equivalents $ 68,000   $ 41,729  
Accounts receivable   17     13  
Prepaid expenses   205     362  
Total current assets   68,222     42,104  
Property and equipment, net   514     515  
Security deposits   25     25  
Total assets $ 68,761   $ 42,644  
LIABILITIES AND SHAREHOLDERS' EQUITY            
Current Liabilities:            
Accrued expenses $ 5,375   $ 5,130  
Accounts payable   991     567  
Accrued payroll and payroll-related expenses   256     354  
Deferred revenue   18     18  
Total current liabilities   6,640     6,069  
Deferred revenue   355     360  
Total liabilities   6,995     6,429  
Shareholders' Equity:            
Preferred stock, $0.01 par value, authorized: 5,000,000 shares; issued and outstanding: none        
Common stock, $0.01 par value, authorized: 150,000,000 shares; issued and outstanding: 65,886,904 and 55,860,313 shares at March 31, 2005 and December 31, 2004, respectively   659     559  
Additional paid-in-capital   197,424     167,421  
Deficit accumulated during the development stage   (136,317   (131,765
    61,766     36,215  
Total liabilities and shareholders' equity $ 68,761   $ 42,644  

The accompanying notes are an integral part of these financial statements.

1




Vion Pharmaceuticals, Inc.
(A Development Stage Company)

Condensed Consolidated Statements of Operations
(Unaudited)


  For the Three Months Ended
March 31,
May 1, 1994 (Inception)
through
March 31, 2005
(In thousands, except per share data) 2005 2004
Revenues:
Technology license fees $ 5   $ 9   $ 4,492  
Research and laboratory support fees       24     5,931  
Contract research grants       63     2,501  
Total revenues   5     96     12,924  
Operating expenses:
Clinical trials   3,049     1,805     39,561  
Other research and development   1,145     957     68,151  
Total research and development   4,194     2,762     107,712  
General and administrative   691     617     28,400  
Total operating expenses   4,885     3,379     136,112  
Loss from operations   (4,880   (3,283   (123,188
Interest income   341     91     5,761  
Interest expense           (210
Other expense, net   (2   (32   (120
Loss before income taxes   (4,541   (3,224   (117,757
Income tax provision   11     34     (184
Net loss   (4,552   (3,258   (117,573
Preferred stock dividends and accretion           (18,489
Loss applicable to common shareholders $ (4,552 $ (3,258 $ (136,062
Loss applicable to common shareholders
per share
$ (0.07 $ (0.07
Weighted-average number of shares of
common stock outstanding
  62,647     47,309  

The accompanying notes are an integral part of these financial statements.

2




Vion Pharmaceuticals, Inc.
(A Development Stage Company)

Condensed Consolidated Statement of Changes in Shareholders' Equity
(Unaudited)


  Common Stock Additional
Paid-in
Capital
Accumulated
Deficit
Total
Shareholders'
Equity
(In thousands, except share data) Shares Amount
Balance at December 31, 2004   55,860,313   $ 559   $ 167,421   $ (131,765 $ 36,215  
Direct offering – January 2005   10,000,000     100     29,965           30,065  
Exercise of stock options   23,179         26           26  
Issuance under employee benefit plans   3,412           12           12  
Net loss and comprehensive loss                     (4,552   (4,552
Balance at March 31, 2005   65,886,904   $ 659   $ 197,424   $ (136,317 $ 61,766  

The accompanying notes are an integral part of these financial statements.

3




Vion Pharmaceuticals, Inc.
(A Development Stage Company)

Condensed Consolidated Statements of Cash Flows
(Unaudited)


  For the Three Months
Ended March 31,
For The Period From
May 1, 1994
(Inception) through
March 31, 2005
(In thousands) 2005 2004
Cash flows from operating activities:                  
Net loss $ (4,552 $ (3,258 $ (117,573
Adjustments to reconcile net loss to net cash used in
operating activities–
                 
Depreciation and amortization   59     46     2,887  
Loss on equipment disposals           12  
(Decrease) increase in deferred revenue   (5   (4   373  
Purchased research and development           4,481  
Non-cash compensation           1,068  
Stock issued for services           600  
Amortization of financing costs           346  
Extension/reissuance of placement agent warrants           168  
Changes in operating assets and liabilities–                  
Receivables and prepaid expenses   153     (1   (221
Other assets           (22
Current liabilities   571     82     6,587  
Net cash used in operating activities   (3,774   (3,135   (101,294
Cash flows from investing activities:                  
Purchases of marketable securities       (61,901   (321,052
Maturities of marketable securities       68,551     321,052  
Acquisition of equipment   (58   (14   (2,469
Net cash provided by (used in) investing activities   (58   6,636     (2,469
Cash flows from financing activities:                  
Initial public offering           9,696  
Net proceeds from issuance of common stock   30,103     33,029     111,895  
Net proceeds from issuance of preferred stock           20,716  
Net proceeds from exercise of Class A Warrants           5,675  
Net proceeds from exercise of Class B Warrants           17,538  
Net proceeds from exercise of other warrants       5,643     7,456  
Repayment of equipment capital leases           (927
Other financing activities, net           (286
Net cash provided by financing activities   30,103     38,672     171,763  
Change in cash and cash equivalents   26,271     42,173     68,000  
Cash and cash equivalents, beginning of period   41,729     1,219      
Cash and cash equivalents, end of period $ 68,000   $ 43,392   $ 68,000  
Supplemental disclosure of cash flow information:                  
Cash paid for interest $   $   $ 210  
Cash paid for taxes $ 24   $   $ 48  

The accompanying notes are an integral part of these financial statements.

4




Vion Pharmaceuticals, Inc.
(A Development Stage Company)

Notes to Condensed Consolidated Financial Statements
(Unaudited)

1.  The Company

Vion Pharmaceuticals, Inc. (the "Company") is a development stage company engaged in the development of novel therapeutics for the treatment of cancer. The Company, formerly OncoRx, Inc., was incorporated in March 1992 as a Delaware corporation and began operations on May 1, 1994.

2.  Basis of Presentation

The accompanying unaudited condensed consolidated financial statements have been prepared in accordance with accounting principles generally accepted in the United States for interim financial information and with the instructions to Form 10-Q. They do not include all of the information and footnotes required by accounting principles generally accepted in the United States for complete financial statements. In the opinion of management, all adjustments (consisting of normal recurring accruals) considered necessary for a fair presentation have been included. Operating results for interim periods are not necessarily indicative of the results that may be expected for the full year. For further information, refer to the financial statements and footnotes thereto included in the Company's Annual Report on Form 10-K for the year ended December 31, 2004 (File No. 000-26534).

3.  Registered Direct Offering of Common Stock

In January 2005, the Company received net proceeds of $30 million from a registered direct offering of 10 million shares of its common stock at $3.25 per share.

4.  Per Share Data – Anti-dilution

As of March 31, 2005, the Company had outstanding warrants to purchase 9,198,971 shares of its common stock at exercise prices between $2.20 and $3.25 per share, and outstanding stock options to purchase 5,131,449 shares of its common stock at exercise prices between $0.36 and $17.88 per share. These warrants and options were excluded from the computation of diluted loss per share because such warrants and options were anti-dilutive in the respective periods presented.

5.  Income Taxes

For the three months ended March 31, 2005 and 2004, the Company recorded a provision of $11,000 and $34,000, respectively, for minimum state capital taxes paid.

6.  Stock-Based Compensation

The Company follows Accounting Principles Board Opinion No. 25, Accounting for Stock Issued to Employees ("APB 25") and related interpretations in accounting for stock-based compensation issued to employees rather than the alternative fair value accounting method provided for under Statement of Financial Accounting Standards No. 123, Accounting for Stock-Based Compensation ("SFAS 123"). Under APB 25, no compensation expense is recognized if the terms of the option are fixed and the exercise price of the option granted equals the market price of the underlying stock on the date of grant. For the three-month periods ended March 31, 2005 and 2004, no stock-based compensation cost is reflected in the Company's reported net loss.

The following tables illustrate the assumptions used and the effect on net loss and net loss per share if the Company had applied the fair value recognition provision of SFAS 123 to employee stock-based compensation. The Company has computed the pro forma disclosures required under SFAS 123, as amended by Statement of Financial Accounting Standards No. 148, Accounting for Stock-Based Compensation – Transition and Disclosure" ("SFAS 148"), for all employee stock options granted using the Black-Scholes option pricing model prescribed by SFAS 123.

5





  For the Three Months Ended
March 31,
 
  2005 2004  
Risk-free interest rate   4.26   3.14      
Expected volatility   59   134      
Expected life (in years)   5.85     5.89        
Expected dividend yield   0   0      

  For the Three Months
Ended March 31,
From Inception
(May 1, 1994)
through
  2005 2004 March 31, 2005
Reported net loss $ (4,552 $ (3,258 $ (117,573
Add: Stock-based employee compensation expense included in reported net loss           768  
Deduct: Stock-based employee compensation expense determined under the fair value based method for all awards   (450   (538   (21,452
Pro forma net loss   (5,002   (3,796   (138,257
Pro forma preferred stock dividend and accretion           (18,489
Pro forma loss applicable to common shareholders $ (5,002 $ (3,796 $ (156,746
Reported basic and diluted loss applicable to common shareholders per share $ (0.07 $ (0.07      
Pro forma basic and diluted loss applicable to common shareholders per share $ (0.08 $ (0.08      

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ITEM 2.    Management's Discussion and Analysis of Financial Condition and Results of Operations

All statements other than statements of historical fact included in this Quarterly Report on Form 10-Q, including without limitation statements under "Management's Discussion and Analysis of Financial Condition and Results of Operations," regarding our financial position, business strategy, and plans and objectives of our management for future operations, are forward-looking statements. When used in this Quarterly Report on Form 10-Q, words such as "may," "will," "should," "could," "potential," "seek," "project," "predict," "anticipate," "believe," "estimate," "expect," "intend" and similar expressions, as they relate to us or our management, identify forward-looking statements. Forward-looking statements are based on the beliefs of our management as well as assumptions made by and information currently available to our management. Such statements are subject to certain risk factors which may cause our plans to differ or results to vary from those expected, including our ability to secure external sources of funding to continue operations, the inability to access capital and funding on favorable terms, continued operating losses and the inability to continue operations as a result, our dependence on regulatory approval for our products, delayed or unfavorable results of drug trials, the possibility that favorable results of earlier clinical trials are not predictive of safety and efficacy results in later clinical trials, the need for additional research and testing, and a variety of other risks set forth from time to time in our filings with the U.S. Securities and Exchange Commission including, but not limited to, the detailed discussion of risks attendant to the forward-looking statements included under Item 7, "Management's Discussion and Analysis of Financial Condition and Results of Operations" in our Annual Report on Form 10-K for the year ended December 31, 2004. The information contained in this Quarterly Report on Form 10-Q is believed to be current as of the date of filing with the U.S. Securities and Exchange Commission. Except in special circumstances in which a duty to update arises under law when prior disclosure becomes materially misleading in light of subsequent events, we do not intend to update any of these forward-looking statements to reflect events or circumstances after the date hereof or to reflect the occurrence of unanticipated events.

Overview

We are a development stage company engaged in the development of novel therapeutics for the treatment of cancer. Our activities to date have consisted primarily of research and product development, obtaining regulatory approval for clinical trials, conducting clinical trials, negotiating and obtaining collaborative agreements, and obtaining financing in support of these activities. Our revenues have historically primarily consisted of contract research grants, technology license fees, and research and laboratory support fees. Since inception, we have generated minimal revenues and have incurred substantial operating losses from our activities. We expect to incur substantial operating losses for the next several years due to expenses associated with our activities.

Our plan of operations for the next 12 months includes the following elements:

•  Conduct Phase I, Phase II and Phase III clinical studies of CLORETAZINETM (VNP40101M) as a single agent or in combination with standard chemotherapy treatments;
•  Provide product and make payments related to certain patient costs for a Phase I study of CLORETAZINETM (VNP40101M) in pediatric brain tumors and a Phase II study of CLORETAZINETM (VNP40101M) in primary brain tumors conducted under investigators' INDs;
•  Conduct Phase II clinical studies of an intravenous formulation of Triapine® in combination with standard chemotherapy treatments;
•  Provide product for Phase I and Phase II clinical studies sponsored by the National Cancer Institute (NCI) of an intravenous formulation of Triapine® as a single agent and in combination with standard chemotherapy treatments;
•  Provide product for Phase I clinical studies to be sponsored by the NCI of an oral formulation of Triapine®;
•  Conduct additional clinical trials of Triapine® and/or CLORETAZINETM (VNP40101M), depending on the results of the clinical trials already underway;

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•  Continue to conduct internal product development studies with respect to our clinical products and other product candidates that we may identify, including KS119 (which includes its water soluble analogue, KS119W) and heterocyclic hydrazones;
•  Seek development partners for our TAPET® product development program;
•  Continue to support research and development being performed at Yale University and by other collaborators; and
•  Continue to seek collaborative partnerships, joint ventures, co-promotional agreements or other arrangements with third parties.

We have five major research and development projects, which include two product candidates in clinical trials (CLORETAZINETM (VNP40101M) and Triapine®), two product development programs in preclinical development (KS119 and heterocyclic hydrazones) and one product development program for which we are seeking a development partner (TAPET®). The following table provides information on clinical trials sponsored by us that were open for patient accrual as of April 30, 2005.


Product Trial Trial Commencement
Date
CLORETAZINETM (VNP40101M) Phase III trial in relapsed acute myeloid leukemia in combination with Ara-C March 2005
  Phase I trial in combination with temozolomide in patients with hematologic malignancies October 2004
Triapine® Phase II trial of 24-hour infusion in combination with gemcitabine in pancreatic cancer
September 2004

In addition to the above-listed clinical trials for CLORETAZINETM (VNP40101M), a Phase II trial in primary brain tumors was initiated in May 2004 under an investigator's IND. Additionally, a Phase I trial in pediatric brain tumors was initiated in April 2005 by the Pediatric Brain Tumor Consortium (PBTC) under an investigator's IND. We provide product for these trials and incur certain costs related to patient enrollment.

In addition to the above-listed clinical trial for Triapine®, the NCI is also sponsoring Phase I and Phase II single agent or combination clinical trials of that compound. In January 2004, we announced the first trial to open under NCI sponsorship. We provide product for the NCI trials.

Completion of clinical trials may take several years or more and the length of time can vary substantially according to the type, complexity, novelty and intended use of a product candidate. The types of costs incurred during a clinical trial vary depending upon the type of product candidate, the disease treated and the nature of the study.

We expect that we will need to enter into and complete Phase III clinical trials of our products in order to apply for regulatory approval. If we achieve successful completion of Phase III trials which have commenced or which we may in the future commence, of which there can be no certainty, we intend to submit the results to the U.S. Food and Drug Administration (FDA) to support regulatory approval of the product. However, we cannot be certain that any of our products will prove to be safe or effective, will achieve the safety and efficacy needed to enter into Phase III or registrational clinical trials, will receive regulatory approvals, or will be successfully commercialized. Our clinical trials might prove that our product candidates may not be effective in treating the disease or may have undesirable or unintended side effects, toxicities or other characteristics that require us to cease further development of the product. The cost to take a product candidate through clinical trials is dependent upon, among other things, the disease indications, the timing, the size and dosing schedule of each clinical trial, the number of patients enrolled in each trial and the speed at which patients are

8




enrolled and treated. We could incur increased product development costs if we experience delays in trial enrollment, the evaluation of clinical trial results or in applying for or obtaining regulatory approvals. Significant delays could allow our competitors to bring products to market before we do and impair our ability to commercialize our product candidates. These uncertainties and variability make it difficult to accurately predict the future cost of or timing to complete our product development projects.

We budget and monitor our research and development costs by category. Significant categories of costs include personnel, clinical, third party research and development services, and laboratory supplies.

Given the uncertainties related to pharmaceutical product development, we are currently unable to reliably estimate when, if ever, our product candidates will generate revenue and cash flows. We do not expect to receive net cash inflows from any of our major research and development projects until and unless a product candidate becomes a profitable commercial product.

Critical Accounting Policies and Estimates

The accompanying discussion and analysis of our financial condition and results of operations are based upon our financial statements and the related disclosures, which have been prepared in accordance with accounting principles generally accepted in the United States. The preparation of these financial statements requires us to make estimates and assumptions that affect the amounts reported in our financial statements and accompanying notes. These estimates form the basis for making judgments about the carrying values of assets and liabilities. We base our estimates and judgments on historical experience and on various other assumptions that we believe to be reasonable under the circumstances. Actual results could differ materially from these estimates.

We believe the following policies to be the most critical to an understanding of our financial condition and results of operations because they require us to make estimates, assumptions and judgments about matters that are inherently uncertain.

Revenue Recognition

We record revenue from contract research grants, if any, as the costs are incurred. We are reimbursed for eligible costs after submission of grant reports. We are subject to grant audits as required by the Department of Health and Human Services. Audits may result in adjustments to the amount of grant revenues recorded and funds received.

We record revenue under technology license agreements related to the following:

•  Nonrefundable upfront license fees for which no further performance obligations exist are recognized as revenue on the earlier of when payments are received or collection is assured;
•  Nonrefundable upfront license fees including guaranteed, time-based payments that require continuing involvement in the form of development or other efforts by us are recognized as revenue ratably over the performance period; and
•  Milestone payments are recognized as revenue when milestones, as defined in the applicable agreement, are achieved.

Actual license fees received may vary from recorded estimated revenues.

We record revenue from royalties, if any, based on licensees' sales of our products or technologies. Revenues are recognized as earned in accordance with the contract terms when royalties from licensees can be reliably measured and collectibility is reasonably assured. Royalty estimates are made in advance of amounts collected based on historical and forecasted trends.

We record revenue from laboratory and research support, if any, as the services are provided. Actual laboratory and research support fees collected may vary from revenue recognized.

The effect of any change in revenues from contract research grants, technology license agreements, or laboratory and research support would be reflected in revenues in the period such determination was made. Historically, such adjustments have been insignificant.

9




Research and Development Expenses

We record research and development expenses as incurred. We disclose clinical trials expenses and other research and development expenses as separate components of research and development expense in our consolidated statements of operations to provide more meaningful information to our investors. These expenses are based, in part, on estimates of certain costs when incurred. The effect of any change in the clinical trials expenses and other research and development expenses would be reflected in the period such determination was made.

Income Taxes

We provide deferred income taxes for the future tax consequences of temporary differences between the financial statement carrying amounts and the tax basis of assets and liabilities, and on operating loss and tax credit carryforwards. Except for the sales recorded of certain research and development tax credits to the State of Connecticut and the provisions recorded for minimum state capital taxes, we have not recorded a provision or benefit for income taxes in the financial statements due to recurring historical losses and based on judgments regarding the timing of future profitability. Accordingly, we have provided a full valuation allowance for our deferred income tax asset as of March 31, 2005. In the event we were to determine that we would be able to realize deferred income tax assets in the future, an adjustment to reduce the valuation allowance in that period of determination would be made.

Stock-Based Compensation

We measure stock-based compensation expense under Accounting Principles Board Opinion No. 25, Accounting for Stock Issued to Employees ("APB 25"), and related Interpretations, and provide required disclosures under the fair value recognition provisions of Statement of Financial Accounting Standards No. 123, Accounting for Stock –Based Compensation, as amended by Statement of Financial Accounting Standards No. 148, Accounting for Stock-Based Compensation – Transition and Disclosure."

Recently Enacted Pronouncements

There may be potential new accounting pronouncements or regulatory rulings, which may have an impact on our future financial position and results of operations. In December 2004, the Financial Accounting Standards Board issued the revised Statement of Financial Accounting Standards No. 123, Share-Based Payment ("SFAS 123R"). SFAS 123R replaces SFAS 123 and supersedes APB 25. SFAS 123R requires public companies to measure the cost of employee services received in exchange for an award of equity instruments based on the grant-date fair value of these instruments. Companies will be required to recognize an expense for compensation cost related to share-based payment arrangements, including grants of stock options and purchases under employee stock purchase plans, for all awards granted, modified, repurchased or canceled after the effective date. As of the required effective date, companies will apply SFAS 123R using a modified version of prospective application. For periods before the required effective date, companies may elect to apply a modified version of retrospective application. We currently measure share-based compensation expense under APB 25 and provide pro forma disclosures required by SFAS 123. We will be required to adopt SFAS 123R and recognize an expense for share-based compensation in our financial statements no later than the quarter ended March 31, 2006. See Note 6 in our Notes to Condensed Consolidated Financial Statements for the pro forma net loss and net loss per share amounts for the periods presented as if we had used a fair-value-based method similar to the methods required under SFAS 123R to measure compensation expense for share-based payments to employees. We are currently evaluating our option valuation methodologies and assumptions, and have not yet determined when we will adopt SFAS 123R and whether the adoption of SFAS 123R will result in amounts similar to the current pro forma disclosures under SFAS 123. We expect the adoption of SFAS 123R to have a significant adverse impact on our consolidated statements of operations and net loss per share.

10




Results of Operations

Comparison of the Three-Month Periods Ended March 31, 2005 and 2004

Revenues.    Revenues were $5,000 for the three months ended March 31, 2005, compared to $96,000 for the same period in 2004. The decrease was due primarily to lower revenues from research and laboratory support fees, and lower revenues from contract research grants. All revenues under contract research grants have been fully recognized as all grants have expired. Accordingly, we have no material source of revenues.

Research and Development Expenses.    Total research and development ("R&D") expenses were $4.2 million for the three-month period ended March 31, 2005, compared to $2.8 million for the same period in 2004 as a result of higher clinical trials expenses of $1.2 million and higher other R&D expenses of $188,000. The increase in clinical trials expenses was due primarily to higher spending of $1.7 million for clinical trials of CLORETAZINETM (VNP40101M), mainly as a result of costs associated with the initiation of a Phase III trial in March 2005 in relapsed acute myeloid leukemia and patient accrual to a Phase II trial in acute myeloid leukemia and myelodysplastic syndromes, partially offset by lower spending of $505,000 for Triapine® trials due to fewer trials open to patient accrual. The increase in other R&D expenses was primarily due to costs associated with two preclinical product development programs (KS119 and heterocyclic hydrazones) as well as higher payroll costs due to additional employees hired as we move into late-stage clinical development and annual salary increases. We expect total research and development expenses to increase over time mainly due to conducting larger clinical trials, including the Phase III clinical trial of CLORETAZINETM (VNP40101M), and additional development of our preclinical products

General and Administrative Expenses.    General and administrative expenses were $691,000 for the three-month period ended March 31, 2005 as compared to $617,000 for the same period in 2004. The increase was primarily due to higher professional fees for accounting services associated with complying with Sarbanes-Oxley Act requirements.

Interest Income.    Interest income was $341,000 for the three months ended March 31, 2005, as compared to $91,000 for the same 2004 period. The increase was primarily due to higher interest rates and, to a lesser extent, higher levels of invested funds in 2005 as a result of net proceeds received from a registered direct offering of our common stock in January 2005.

Other Expense.    Other expense was $2,000 for the three months ended March 31, 2005, as compared to $32,000 for the same 2004 period. Other expense reflects foreign currency exchange rate fluctuations for payments to a vendor outside the U.S. denominated in a foreign currency.

Income Taxes.    For the three months ended March 31, 2005 and 2004, a provision for minimum state capital taxes was recorded of $11,000 and $34,000, respectively.

Net Loss.    The net loss was $4.6 million, or $0.07 per share based on weighted average shares outstanding of 62.6 million, for the three months ended March 31, 2005, compared to a net loss of $3.3 million, or $0.07 per share based on weighted average shares outstanding of 47.3 million, for the same 2004 period.

Liquidity and Capital Resources

At March 31, 2005, we had cash and cash equivalents of $68.0 million compared to cash and cash equivalents of $41.7 million at December 31, 2004. The increase in 2005 was due primarily to net proceeds of $30.0 million from a registered direct offering of our common stock in January 2005, described below, offset by cash used of $3.8 million to fund operating activities.

Cash Used in Operating Activities

Cash used in operating activities is primarily a result of our net loss. However, operating cash flows differ from net loss as a result of non-cash charges, changes in operating assets and liabilities, or differences in the timing of cash flows and earnings/expense recognition. Significant components of cash used in operating activities are as follows:

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Receivables and prepaid expenses decreased $153,000 during the three months ended March 31, 2005 compared to an increase of $1,000 for the same 2004 period. The decrease in 2005 was primarily due to the utilization of a deposit paid in 2004 in connection with a clinical research agreement and a reduction of prepaid insurance expense as the timing of insurance premium payments differs from the recognition of insurance expense.

Current liabilities increased $571,000 during the three months ended March 31, 2005 compared to an increase of $82,000 for the same 2004 period. The increases in 2005 and 2004 were primarily due to increases in our clinical trials liability as the timing of payments to clinical vendors differs from the recognition of clinical trials expenses.

Cash Provided by or Used in Investing Activities

Cash provided by or used in investing activities primarily relates to the purchases and maturities of investments and acquisitions of capital equipment. For the three months ended March 31, 2004, purchases of marketable securities totaled $61.9 million and maturities of marketable securities totaled $68.6 million. Cash provided by the maturities of these short-term investments was reinvested during the second quarter of 2004 in cash equivalents, including U.S. treasury securities and a money market fund. As a result, short-term investments were reduced to zero. Capital expenditures were $58,000 for the three months ended March 31, 2005 and $14,000 for the same 2004 period. The increase in 2005 capital expenditures was due primarily to the purchase of computer software and hardware. Capital expenditures for fiscal 2005 are not expected to exceed $500,000.

Cash Provided by Financing Activities

Cash provided by financing activities is primarily related to capital raised, warrant exercise proceeds and proceeds from common stock issuances under our employee stock plans. For the three months ended March 31, 2005, we received $30.1 million consisting of net proceeds of $30.0 million from a registered direct offering described below and proceeds of $38,000 from issuances of 26,591 shares of our common stock under employee stock plans. For the three months ended March 31, 2004, we received $38.7 million due to net proceeds of $33.0 million from a private placement described below, proceeds of $5.6 million from warrant exercises described below and proceeds of $70,000 from issuances of 19,250 shares of our common stock under employee stock plans.

In January 2005, we completed a registered direct offering of 10 million shares of our common stock at $3.25 per share. Net proceeds from the private placement totaling $30.0 million will be used to fund clinical and preclinical product development activities, and for working capital and general corporate purposes.

In February 2004, we completed a private placement of 13,553,845 shares of our common stock at $2.60 per share. The investors also received warrants to purchase 3,388,463 shares of common stock at $3.25 per share and the placement agent received a warrant to purchase an additional 300,000 shares of common stock at $3.25 per share. All of these warrants expire on February 11, 2009. Net proceeds from the private placement totaling $33.0 million will be used to fund clinical and preclinical product development activities, and for working capital and general corporate purposes.

For the three months ended March 31, 2004, we issued 2,337,154 shares of our common stock upon exercises of warrants issued in connection with a private placement in 2003, resulting in proceeds of $5.6 million.

Future Cash Requirements

Based on our current operating plan, we estimate that our existing cash and cash equivalents totaling $68.0 million at March 31, 2005 will be sufficient to fund our operations into 2007. Our operating plans and cash requirements may vary materially from the foregoing due to the results of preclinical development, clinical trials, product testing, relationships with strategic partners, changes in focus and direction of our preclinical and clinical development programs, competitive and technological advances, the regulatory process in the United States and abroad, and other factors. In

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the future, we will need to raise substantial capital to complete our product development and clinical trials and to fund operations in 2007 and beyond, however, we cannot assure you that we will be able to raise additional capital, nor can we predict what the terms of any financing might be.

Off-Balance Sheet Financing

We have no off-balance sheet arrangements that have a material current effect or that are reasonably likely to have a material future effect on our financial position or results of operations.

Contractual Obligations

During the first three months of 2005, there was no significant changes in our reported payments due under contractual obligations and disclosed contingent contractual obligations at December 31, 2004.

Available Information

The following information can be found on our website at http://www.vionpharm.com or may be obtained free of charge by contacting our Investor Relations Department at (203) 498-4210 or by sending an e-mail message to info@vionpharm.com:

•  our annual report on Form 10-K, quarterly reports on Form 10-Q, current reports on Form 8-K and any amendments to those reports as soon as reasonably practicable after such material is electronically filed with the Securities and Exchange Commission;
•  our policies related to corporate governance, including the charter for the Nominating and Governance Committee of our Board of Directors, our code of ethics and business conduct applying to our directors, officers and employees, and our code of ethics applying to our chief executive officer and senior financial officials; and
•  the charter of the Audit Committee of our Board of Directors.

ITEM 3.    Quantitative and Qualitative Disclosures About Market Risk

We are exposed to market risk, including changes to interest rates associated with our cash equivalents, and foreign currency exchange rates. The following describes the nature of these risks which we do not believe to be material to us.

Our cash equivalents are generally highly liquid investments in money market funds and U.S. treasury securities. Investments in fixed rate interest earning instruments carry a degree of interest risk. Due in part to these factors, our future investment income may fall short of expectations due to changes in interest rates or we may suffer losses in principal if forced to sell securities that have declined in market value due to changes in interest rates. However, the conservative nature of our investments mitigates our interest rate exposure. Our investments are held for purposes other than trading and we believe that we currently have no material adverse market risk exposure. The cash equivalents as of March 31, 2005 had maturities of up to 28 days. The weighted-average interest rate on cash equivalents held at March 31, 2005 was approximately 2.6%.

We have a contract with a vendor outside the U.S. that is denominated in a foreign currency. To date, fluctuations in this foreign currency exchange rate have not materially impacted our results of operations. We have no derivative financial instruments. We do not believe we have material exposures to changes in foreign currency exchange rates.

ITEM 4.    Controls and Procedures

(a) Disclosure controls and procedures – Our management, with the participation of our chief executive officer and chief financial officer, has evaluated the effectiveness of our disclosure controls and procedures as of March 31, 2005. Based on that evaluation, our chief executive officer and chief financial officer have concluded that our disclosure controls and procedures are effective for the

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purpose of ensuring that material information required to be in this quarterly report is made known to them by others on a timely basis and that information required to be disclosed by us in the reports that we file or submit under the Securities Exchange Act of 1934, as amended, is accumulated and communicated to the company's management, including its principal executive and principal financial officers, as appropriate to allow timely decisions regarding required disclosure.

(b) Changes in internal control over financial reporting – There has been no change in our internal control over financial reporting during the period covered by this quarterly report or in other factors that has materially affected or is reasonably likely to materially affect the Company's internal control.

PART II

OTHER INFORMATION

ITEM 6.    Exhibits


10.52 Placement Agency Agreement by and among Vion Pharmaceuticals, Inc., CIBC World Markets Corp. and Leerink Swann & Company, dated January 25, 2005 (1)
10.53 Escrow Agreement by and between Vion Pharmaceuticals, Inc., JPMorgan Chase Bank, N.A. and CIBC World Markets Corp., dated January 25, 2005 (1)
31.1 Certification of the Chief Executive Officer pursuant to Section 302 of the Sarbanes-Oxley Act of 2002
31.2 Certification of the Chief Financial Officer pursuant to Section 302 of the Sarbanes-Oxley Act of 2002
32.1 Certification of the Chief Executive Officer pursuant to Section 906 of the Sarbanes-Oxley Act of 2002
32.2 Certification of the Chief Financial Officer pursuant to Section 906 of the Sarbanes-Oxley Act of 2002
(1) Incorporated by reference to the Company's Current Report on Form 8-K filed on January 26, 2005.

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SIGNATURES

Pursuant to the requirements of the Securities Exchange Act of 1934, the registrant has duly caused this report to be signed on its behalf by the undersigned thereunto duly authorized, in the City of New Haven, State of Connecticut on May 3, 2005.


  VION PHARMACEUTICALS, INC.
  By: /s/ Howard B. Johnson
  Howard B. Johnson
  President and Chief Financial Officer

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